Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 FSCN1P1-201ENST00000568912 1481 ntBASIC20.56■□□□□ 0.88
LRRC3Q9BY71 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 B3GAT3P1-201ENST00000471720 806 ntBASIC20.55■□□□□ 0.88
LRRC3Q9BY71 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 NAPSB-206ENST00000562112 1266 ntBASIC20.55■□□□□ 0.88
LRRC3Q9BY71 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
LRRC3Q9BY71 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 AC005363.2-201ENST00000618631 242 ntBASIC20.54■□□□□ 0.88
LRRC3Q9BY71 AC092865.7-201ENST00000641832 219 ntBASIC20.54■□□□□ 0.88
LRRC3Q9BY71 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 BX119927.1-201ENST00000636596 1552 ntBASIC20.54■□□□□ 0.88
LRRC3Q9BY71 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC3Q9BY71 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC3Q9BY71 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC3Q9BY71 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC3Q9BY71 AC005521.1-201ENST00000393351 872 ntBASIC20.53■□□□□ 0.88
LRRC3Q9BY71 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC3Q9BY71 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC3Q9BY71 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC3Q9BY71 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.53■□□□□ 0.88
LRRC3Q9BY71 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC3Q9BY71 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LRRC3Q9BY71 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC3Q9BY71 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC3Q9BY71 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC3Q9BY71 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LRRC3Q9BY71 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LRRC3Q9BY71 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC3Q9BY71 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LRRC3Q9BY71 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC3Q9BY71 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LRRC3Q9BY71 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LRRC3Q9BY71 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
LRRC3Q9BY71 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC3Q9BY71 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.52■□□□□ 0.88
LRRC3Q9BY71 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC3Q9BY71 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC3Q9BY71 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC3Q9BY71 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC3Q9BY71 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC3Q9BY71 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
LRRC3Q9BY71 SLC25A24-204ENST00000569674 2357 ntBASIC20.52■□□□□ 0.88
LRRC3Q9BY71 AC073508.3-201ENST00000619697 1419 ntBASIC20.52■□□□□ 0.87
LRRC3Q9BY71 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.52■□□□□ 0.87
LRRC3Q9BY71 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC3Q9BY71 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC3Q9BY71 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC3Q9BY71 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC3Q9BY71 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC3Q9BY71 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC3Q9BY71 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC3Q9BY71 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRRC3Q9BY71 AP005242.2-201ENST00000580065 1175 ntBASIC20.51■□□□□ 0.87
LRRC3Q9BY71 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LRRC3Q9BY71 HLA-A-209ENST00000638375 975 ntBASIC20.51■□□□□ 0.87
LRRC3Q9BY71 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC3Q9BY71 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC3Q9BY71 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC3Q9BY71 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC3Q9BY71 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC3Q9BY71 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC3Q9BY71 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms