Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD9AQ99638 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD9AQ99638 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.09■□□□□ 0.97
RAD9AQ99638 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAD9AQ99638 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.09■□□□□ 0.97
RAD9AQ99638 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.09■□□□□ 0.97
RAD9AQ99638 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.09■□□□□ 0.97
RAD9AQ99638 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.09■□□□□ 0.97
RAD9AQ99638 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.09■□□□□ 0.97
RAD9AQ99638 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.09■□□□□ 0.97
RAD9AQ99638 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAD9AQ99638 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD9AQ99638 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD9AQ99638 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD9AQ99638 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAD9AQ99638 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAD9AQ99638 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAD9AQ99638 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAD9AQ99638 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RAD9AQ99638 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.08■□□□□ 0.97
RAD9AQ99638 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.08■□□□□ 0.97
RAD9AQ99638 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.08■□□□□ 0.97
RAD9AQ99638 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RAD9AQ99638 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.08■□□□□ 0.97
RAD9AQ99638 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.08■□□□□ 0.97
RAD9AQ99638 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.08■□□□□ 0.97
RAD9AQ99638 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.08■□□□□ 0.97
RAD9AQ99638 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.08■□□□□ 0.97
RAD9AQ99638 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.08■□□□□ 0.97
RAD9AQ99638 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.08■□□□□ 0.97
RAD9AQ99638 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.08■□□□□ 0.97
RAD9AQ99638 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.08■□□□□ 0.97
RAD9AQ99638 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAD9AQ99638 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAD9AQ99638 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.08■□□□□ 0.96
RAD9AQ99638 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAD9AQ99638 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAD9AQ99638 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.07■□□□□ 0.96
RAD9AQ99638 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAD9AQ99638 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAD9AQ99638 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.07■□□□□ 0.96
RAD9AQ99638 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAD9AQ99638 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAD9AQ99638 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RAD9AQ99638 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAD9AQ99638 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAD9AQ99638 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.07■□□□□ 0.96
RAD9AQ99638 AL353719.1-201ENST00000566847 864 ntBASIC21.07■□□□□ 0.96
RAD9AQ99638 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.07■□□□□ 0.96
RAD9AQ99638 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAD9AQ99638 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.07■□□□□ 0.96
RAD9AQ99638 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAD9AQ99638 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAD9AQ99638 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.07■□□□□ 0.96
RAD9AQ99638 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.07■□□□□ 0.96
RAD9AQ99638 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAD9AQ99638 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAD9AQ99638 PLK5-205ENST00000642079 1969 ntBASIC21.06■□□□□ 0.96
RAD9AQ99638 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAD9AQ99638 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAD9AQ99638 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.06■□□□□ 0.96
RAD9AQ99638 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAD9AQ99638 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAD9AQ99638 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAD9AQ99638 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
RAD9AQ99638 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.06■□□□□ 0.96
RAD9AQ99638 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.06■□□□□ 0.96
RAD9AQ99638 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAD9AQ99638 DUSP5P1-201ENST00000441325 1139 ntBASIC21.06■□□□□ 0.96
RAD9AQ99638 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.06■□□□□ 0.96
RAD9AQ99638 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAD9AQ99638 AC140113.3-201ENST00000605663 199 ntBASIC21.06■□□□□ 0.96
RAD9AQ99638 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.06■□□□□ 0.96
RAD9AQ99638 AC093458.2-201ENST00000623150 629 ntBASIC21.06■□□□□ 0.96
RAD9AQ99638 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAD9AQ99638 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAD9AQ99638 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAD9AQ99638 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAD9AQ99638 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RAD9AQ99638 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RAD9AQ99638 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAD9AQ99638 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.05■□□□□ 0.96
RAD9AQ99638 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAD9AQ99638 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.05■□□□□ 0.96
RAD9AQ99638 PHGDH-210ENST00000641115 1638 ntBASIC21.05■□□□□ 0.96
RAD9AQ99638 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RAD9AQ99638 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAD9AQ99638 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAD9AQ99638 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAD9AQ99638 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RAD9AQ99638 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAD9AQ99638 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.05■□□□□ 0.96
RAD9AQ99638 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.05■□□□□ 0.96
RAD9AQ99638 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.05■□□□□ 0.96
RAD9AQ99638 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.05■□□□□ 0.96
RAD9AQ99638 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAD9AQ99638 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAD9AQ99638 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAD9AQ99638 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.05■□□□□ 0.96
RAD9AQ99638 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms