Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
SLC38A3Q99624 AC020907.5-201ENST00000624372 1936 ntBASIC19.07■□□□□ 0.64
SLC38A3Q99624 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC38A3Q99624 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC38A3Q99624 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC38A3Q99624 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SLC38A3Q99624 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC38A3Q99624 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SLC38A3Q99624 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.06■□□□□ 0.64
SLC38A3Q99624 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SLC38A3Q99624 AC087499.1-201ENST00000418141 1075 ntBASIC19.06■□□□□ 0.64
SLC38A3Q99624 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC38A3Q99624 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC38A3Q99624 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC38A3Q99624 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC38A3Q99624 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC38A3Q99624 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC38A3Q99624 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC38A3Q99624 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC38A3Q99624 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC38A3Q99624 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC38A3Q99624 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.05■□□□□ 0.64
SLC38A3Q99624 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC38A3Q99624 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC38A3Q99624 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC38A3Q99624 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC38A3Q99624 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC38A3Q99624 C1QL1P1-201ENST00000568105 661 ntBASIC19.05■□□□□ 0.64
SLC38A3Q99624 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC38A3Q99624 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC38A3Q99624 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.05■□□□□ 0.64
SLC38A3Q99624 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC38A3Q99624 BX119927.1-201ENST00000636596 1552 ntBASIC19.05■□□□□ 0.64
SLC38A3Q99624 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC38A3Q99624 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC38A3Q99624 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC38A3Q99624 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC38A3Q99624 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 KRT18P16-201ENST00000510337 1294 ntBASIC19.04■□□□□ 0.64
SLC38A3Q99624 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC38A3Q99624 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SLC38A3Q99624 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SLC38A3Q99624 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
SLC38A3Q99624 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC38A3Q99624 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC38A3Q99624 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC38A3Q99624 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SLC38A3Q99624 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC38A3Q99624 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
SLC38A3Q99624 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC38A3Q99624 MMP23A-201ENST00000234610 1017 ntBASIC19.03■□□□□ 0.64
SLC38A3Q99624 UNC93B2-201ENST00000285383 730 ntBASIC19.03■□□□□ 0.64
SLC38A3Q99624 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC38A3Q99624 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC38A3Q99624 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC38A3Q99624 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC38A3Q99624 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC38A3Q99624 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.03■□□□□ 0.64
SLC38A3Q99624 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC38A3Q99624 REXO1L10P-201ENST00000615707 1290 ntBASIC19.03■□□□□ 0.64
SLC38A3Q99624 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC38A3Q99624 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.03■□□□□ 0.64
SLC38A3Q99624 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC38A3Q99624 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC38A3Q99624 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms