Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SPENQ96T58 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SPENQ96T58 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.82■□□□□ 0.44
SPENQ96T58 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SPENQ96T58 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SPENQ96T58 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SPENQ96T58 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SPENQ96T58 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.82■□□□□ 0.44
SPENQ96T58 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SPENQ96T58 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPENQ96T58 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SPENQ96T58 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.81■□□□□ 0.44
SPENQ96T58 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.81■□□□□ 0.44
SPENQ96T58 LIN28AP1-201ENST00000429574 405 ntBASIC17.81■□□□□ 0.44
SPENQ96T58 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.81■□□□□ 0.44
SPENQ96T58 AC116407.4-201ENST00000623319 1061 ntBASIC17.81■□□□□ 0.44
SPENQ96T58 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.81■□□□□ 0.44
SPENQ96T58 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPENQ96T58 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.81■□□□□ 0.44
SPENQ96T58 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPENQ96T58 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPENQ96T58 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPENQ96T58 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.81■□□□□ 0.44
SPENQ96T58 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.81■□□□□ 0.44
SPENQ96T58 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.81■□□□□ 0.44
SPENQ96T58 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPENQ96T58 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SPENQ96T58 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.81■□□□□ 0.44
SPENQ96T58 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPENQ96T58 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SPENQ96T58 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPENQ96T58 FAM207BP-201ENST00000447172 505 ntBASIC17.8■□□□□ 0.44
SPENQ96T58 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.8■□□□□ 0.44
SPENQ96T58 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.8■□□□□ 0.44
SPENQ96T58 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
SPENQ96T58 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.8■□□□□ 0.44
SPENQ96T58 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPENQ96T58 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPENQ96T58 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.8■□□□□ 0.44
SPENQ96T58 PVRIG2P-201ENST00000435460 978 ntBASIC17.8■□□□□ 0.44
SPENQ96T58 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SPENQ96T58 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPENQ96T58 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SPENQ96T58 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.8■□□□□ 0.44
SPENQ96T58 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPENQ96T58 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPENQ96T58 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPENQ96T58 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPENQ96T58 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPENQ96T58 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPENQ96T58 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.8■□□□□ 0.44
SPENQ96T58 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPENQ96T58 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.79■□□□□ 0.44
SPENQ96T58 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.79■□□□□ 0.44
SPENQ96T58 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.79■□□□□ 0.44
SPENQ96T58 AL023803.3-201ENST00000615559 522 ntBASIC17.79■□□□□ 0.44
SPENQ96T58 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPENQ96T58 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPENQ96T58 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPENQ96T58 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SPENQ96T58 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPENQ96T58 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPENQ96T58 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPENQ96T58 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPENQ96T58 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.79■□□□□ 0.44
SPENQ96T58 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPENQ96T58 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPENQ96T58 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SPENQ96T58 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.79■□□□□ 0.44
SPENQ96T58 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPENQ96T58 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SPENQ96T58 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPENQ96T58 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.79■□□□□ 0.44
SPENQ96T58 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.79■□□□□ 0.44
SPENQ96T58 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPENQ96T58 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPENQ96T58 RCC2P6-201ENST00000526625 1557 ntBASIC17.79■□□□□ 0.44
SPENQ96T58 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SPENQ96T58 EGLN1P1-201ENST00000531623 762 ntBASIC17.78■□□□□ 0.44
SPENQ96T58 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
SPENQ96T58 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPENQ96T58 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPENQ96T58 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPENQ96T58 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPENQ96T58 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPENQ96T58 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPENQ96T58 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPENQ96T58 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.78■□□□□ 0.44
SPENQ96T58 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPENQ96T58 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.78■□□□□ 0.44
SPENQ96T58 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPENQ96T58 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPENQ96T58 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPENQ96T58 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SPENQ96T58 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPENQ96T58 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPENQ96T58 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPENQ96T58 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPENQ96T58 RNF152P1-201ENST00000397754 604 ntBASIC17.77■□□□□ 0.44
SPENQ96T58 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms