Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SNX27Q96L92 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
SNX27Q96L92 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SNX27Q96L92 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.26■□□□□ 0.99
SNX27Q96L92 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX27Q96L92 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX27Q96L92 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNX27Q96L92 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX27Q96L92 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX27Q96L92 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.26■□□□□ 0.99
SNX27Q96L92 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX27Q96L92 FAM197Y1-201ENST00000421178 764 ntBASIC21.26■□□□□ 0.99
SNX27Q96L92 TUBB8P6-201ENST00000436895 1288 ntBASIC21.26■□□□□ 0.99
SNX27Q96L92 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.26■□□□□ 0.99
SNX27Q96L92 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.26■□□□□ 0.99
SNX27Q96L92 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.26■□□□□ 0.99
SNX27Q96L92 MIR4785-201ENST00000585005 73 ntBASIC21.26■□□□□ 0.99
SNX27Q96L92 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX27Q96L92 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.26■□□□□ 0.99
SNX27Q96L92 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX27Q96L92 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNX27Q96L92 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX27Q96L92 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
SNX27Q96L92 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNX27Q96L92 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX27Q96L92 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNX27Q96L92 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX27Q96L92 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.26■□□□□ 0.99
SNX27Q96L92 TMEM179-206ENST00000616017 1645 ntBASIC21.26■□□□□ 0.99
SNX27Q96L92 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.25■□□□□ 0.99
SNX27Q96L92 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNX27Q96L92 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNX27Q96L92 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNX27Q96L92 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SNX27Q96L92 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SNX27Q96L92 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.25■□□□□ 0.99
SNX27Q96L92 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SNX27Q96L92 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNX27Q96L92 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.25■□□□□ 0.99
SNX27Q96L92 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.25■□□□□ 0.99
SNX27Q96L92 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.25■□□□□ 0.99
SNX27Q96L92 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SNX27Q96L92 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.25■□□□□ 0.99
SNX27Q96L92 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNX27Q96L92 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
SNX27Q96L92 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SNX27Q96L92 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.25■□□□□ 0.99
SNX27Q96L92 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SNX27Q96L92 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.25■□□□□ 0.99
SNX27Q96L92 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.24■□□□□ 0.99
SNX27Q96L92 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
SNX27Q96L92 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNX27Q96L92 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNX27Q96L92 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.24■□□□□ 0.99
SNX27Q96L92 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNX27Q96L92 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNX27Q96L92 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNX27Q96L92 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SNX27Q96L92 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.24■□□□□ 0.99
SNX27Q96L92 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.24■□□□□ 0.99
SNX27Q96L92 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.24■□□□□ 0.99
SNX27Q96L92 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.24■□□□□ 0.99
SNX27Q96L92 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.24■□□□□ 0.99
SNX27Q96L92 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.24■□□□□ 0.99
SNX27Q96L92 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.24■□□□□ 0.99
SNX27Q96L92 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SNX27Q96L92 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNX27Q96L92 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SNX27Q96L92 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SNX27Q96L92 KRT17P2-201ENST00000300992 1314 ntBASIC21.24■□□□□ 0.99
SNX27Q96L92 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNX27Q96L92 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.23■□□□□ 0.99
SNX27Q96L92 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX27Q96L92 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.23■□□□□ 0.99
SNX27Q96L92 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX27Q96L92 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.23■□□□□ 0.99
SNX27Q96L92 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX27Q96L92 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX27Q96L92 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX27Q96L92 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX27Q96L92 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.23■□□□□ 0.99
SNX27Q96L92 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.23■□□□□ 0.99
SNX27Q96L92 AC026471.5-201ENST00000615068 467 ntBASIC21.23■□□□□ 0.99
SNX27Q96L92 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.23■□□□□ 0.99
SNX27Q96L92 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.23■□□□□ 0.99
SNX27Q96L92 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX27Q96L92 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.23■□□□□ 0.99
SNX27Q96L92 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SNX27Q96L92 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNX27Q96L92 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.23■□□□□ 0.99
SNX27Q96L92 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.23■□□□□ 0.99
SNX27Q96L92 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX27Q96L92 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX27Q96L92 AC009237.14-201ENST00000609975 1594 ntBASIC21.23■□□□□ 0.99
SNX27Q96L92 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNX27Q96L92 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
SNX27Q96L92 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX27Q96L92 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX27Q96L92 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.22■□□□□ 0.99
SNX27Q96L92 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms