Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.93■□□□□ 0.78
SHDQ96IW2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHDQ96IW2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.93■□□□□ 0.78
SHDQ96IW2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHDQ96IW2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SHDQ96IW2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHDQ96IW2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHDQ96IW2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.93■□□□□ 0.78
SHDQ96IW2 HCG4P8-203ENST00000443049 980 ntBASIC19.93■□□□□ 0.78
SHDQ96IW2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.93■□□□□ 0.78
SHDQ96IW2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.93■□□□□ 0.78
SHDQ96IW2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.93■□□□□ 0.78
SHDQ96IW2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SHDQ96IW2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHDQ96IW2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SHDQ96IW2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.93■□□□□ 0.78
SHDQ96IW2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHDQ96IW2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SHDQ96IW2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.93■□□□□ 0.78
SHDQ96IW2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHDQ96IW2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SHDQ96IW2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHDQ96IW2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SHDQ96IW2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SHDQ96IW2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHDQ96IW2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHDQ96IW2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHDQ96IW2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHDQ96IW2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.92■□□□□ 0.78
SHDQ96IW2 CA15P1-201ENST00000481698 905 ntBASIC19.92■□□□□ 0.78
SHDQ96IW2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.92■□□□□ 0.78
SHDQ96IW2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.92■□□□□ 0.78
SHDQ96IW2 AC069148.1-201ENST00000608741 768 ntBASIC19.92■□□□□ 0.78
SHDQ96IW2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHDQ96IW2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.92■□□□□ 0.78
SHDQ96IW2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.92■□□□□ 0.78
SHDQ96IW2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SHDQ96IW2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHDQ96IW2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SHDQ96IW2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHDQ96IW2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHDQ96IW2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHDQ96IW2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.91■□□□□ 0.78
SHDQ96IW2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.91■□□□□ 0.78
SHDQ96IW2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.91■□□□□ 0.78
SHDQ96IW2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHDQ96IW2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.91■□□□□ 0.78
SHDQ96IW2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.91■□□□□ 0.78
SHDQ96IW2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.91■□□□□ 0.78
SHDQ96IW2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.91■□□□□ 0.78
SHDQ96IW2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHDQ96IW2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.91■□□□□ 0.78
SHDQ96IW2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHDQ96IW2 PHGDH-210ENST00000641115 1638 ntBASIC19.91■□□□□ 0.78
SHDQ96IW2 DPP3P2-201ENST00000416030 1696 ntBASIC19.91■□□□□ 0.78
SHDQ96IW2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHDQ96IW2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHDQ96IW2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHDQ96IW2 AL121603.2-201ENST00000557373 2117 ntBASIC19.9■□□□□ 0.78
SHDQ96IW2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.9■□□□□ 0.78
SHDQ96IW2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHDQ96IW2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHDQ96IW2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHDQ96IW2 AL359075.1-203ENST00000462729 1002 ntBASIC19.9■□□□□ 0.78
SHDQ96IW2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.9■□□□□ 0.78
SHDQ96IW2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SHDQ96IW2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHDQ96IW2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.9■□□□□ 0.78
SHDQ96IW2 AC008622.2-201ENST00000617006 1229 ntBASIC19.9■□□□□ 0.78
SHDQ96IW2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
SHDQ96IW2 AC116407.4-201ENST00000623319 1061 ntBASIC19.9■□□□□ 0.78
SHDQ96IW2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHDQ96IW2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SHDQ96IW2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
SHDQ96IW2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.9■□□□□ 0.78
SHDQ96IW2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHDQ96IW2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHDQ96IW2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.9■□□□□ 0.78
SHDQ96IW2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SHDQ96IW2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
SHDQ96IW2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHDQ96IW2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHDQ96IW2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHDQ96IW2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
SHDQ96IW2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHDQ96IW2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.89■□□□□ 0.77
SHDQ96IW2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHDQ96IW2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHDQ96IW2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHDQ96IW2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHDQ96IW2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHDQ96IW2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHDQ96IW2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHDQ96IW2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHDQ96IW2 AP000523.1-201ENST00000398242 1049 ntBASIC19.89■□□□□ 0.77
SHDQ96IW2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHDQ96IW2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.89■□□□□ 0.77
SHDQ96IW2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHDQ96IW2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
SHDQ96IW2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms