Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM11Q96F44 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TRIM11Q96F44 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
TRIM11Q96F44 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM11Q96F44 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM11Q96F44 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM11Q96F44 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM11Q96F44 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM11Q96F44 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM11Q96F44 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TRIM11Q96F44 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM11Q96F44 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM11Q96F44 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TRIM11Q96F44 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM11Q96F44 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM11Q96F44 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM11Q96F44 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM11Q96F44 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.8■□□□□ 0.92
TRIM11Q96F44 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.8■□□□□ 0.92
TRIM11Q96F44 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
TRIM11Q96F44 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRIM11Q96F44 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM11Q96F44 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TRIM11Q96F44 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM11Q96F44 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM11Q96F44 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM11Q96F44 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM11Q96F44 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRIM11Q96F44 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM11Q96F44 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
TRIM11Q96F44 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM11Q96F44 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM11Q96F44 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM11Q96F44 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRIM11Q96F44 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM11Q96F44 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.79■□□□□ 0.92
TRIM11Q96F44 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.79■□□□□ 0.92
TRIM11Q96F44 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM11Q96F44 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.79■□□□□ 0.92
TRIM11Q96F44 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.79■□□□□ 0.92
TRIM11Q96F44 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TRIM11Q96F44 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM11Q96F44 TFP1-202ENST00000475455 1573 ntBASIC20.79■□□□□ 0.92
TRIM11Q96F44 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM11Q96F44 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TRIM11Q96F44 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM11Q96F44 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM11Q96F44 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM11Q96F44 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM11Q96F44 AIRN-201ENST00000601203 4374 ntBASIC20.78■□□□□ 0.92
TRIM11Q96F44 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM11Q96F44 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRIM11Q96F44 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TRIM11Q96F44 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM11Q96F44 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRIM11Q96F44 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.78■□□□□ 0.92
TRIM11Q96F44 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
TRIM11Q96F44 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.78■□□□□ 0.92
TRIM11Q96F44 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM11Q96F44 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.78■□□□□ 0.92
TRIM11Q96F44 AC097658.1-201ENST00000475555 843 ntBASIC20.78■□□□□ 0.92
TRIM11Q96F44 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM11Q96F44 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.78■□□□□ 0.92
TRIM11Q96F44 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM11Q96F44 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRIM11Q96F44 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM11Q96F44 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM11Q96F44 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM11Q96F44 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM11Q96F44 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM11Q96F44 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM11Q96F44 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM11Q96F44 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM11Q96F44 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM11Q96F44 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM11Q96F44 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRIM11Q96F44 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM11Q96F44 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM11Q96F44 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM11Q96F44 HLA-B-256ENST00000639848 1089 ntBASIC20.77■□□□□ 0.92
TRIM11Q96F44 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.77■□□□□ 0.92
TRIM11Q96F44 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms