Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP13Q92995 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP13Q92995 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP13Q92995 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP13Q92995 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP13Q92995 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.59■□□□□ 0.89
USP13Q92995 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP13Q92995 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP13Q92995 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP13Q92995 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP13Q92995 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP13Q92995 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
USP13Q92995 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP13Q92995 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.59■□□□□ 0.89
USP13Q92995 AC097493.4-201ENST00000641197 219 ntBASIC20.59■□□□□ 0.89
USP13Q92995 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP13Q92995 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP13Q92995 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP13Q92995 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP13Q92995 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
USP13Q92995 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP13Q92995 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP13Q92995 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
USP13Q92995 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP13Q92995 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP13Q92995 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.58■□□□□ 0.89
USP13Q92995 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP13Q92995 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP13Q92995 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP13Q92995 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
USP13Q92995 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP13Q92995 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.58■□□□□ 0.89
USP13Q92995 KRT18P21-201ENST00000515767 1272 ntBASIC20.58■□□□□ 0.89
USP13Q92995 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
USP13Q92995 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.58■□□□□ 0.89
USP13Q92995 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.58■□□□□ 0.89
USP13Q92995 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
USP13Q92995 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP13Q92995 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
USP13Q92995 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP13Q92995 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.58■□□□□ 0.88
USP13Q92995 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP13Q92995 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.58■□□□□ 0.88
USP13Q92995 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
USP13Q92995 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.58■□□□□ 0.88
USP13Q92995 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.58■□□□□ 0.88
USP13Q92995 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP13Q92995 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP13Q92995 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.57■□□□□ 0.88
USP13Q92995 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP13Q92995 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.57■□□□□ 0.88
USP13Q92995 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
USP13Q92995 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP13Q92995 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP13Q92995 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP13Q92995 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP13Q92995 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP13Q92995 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
USP13Q92995 NUDT16P1-203ENST00000513809 620 ntBASIC20.57■□□□□ 0.88
USP13Q92995 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.57■□□□□ 0.88
USP13Q92995 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.57■□□□□ 0.88
USP13Q92995 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP13Q92995 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP13Q92995 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP13Q92995 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.57■□□□□ 0.88
USP13Q92995 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP13Q92995 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP13Q92995 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP13Q92995 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP13Q92995 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP13Q92995 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.56■□□□□ 0.88
USP13Q92995 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
USP13Q92995 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP13Q92995 LINC01006-201ENST00000333319 2292 ntBASIC20.56■□□□□ 0.88
USP13Q92995 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP13Q92995 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP13Q92995 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP13Q92995 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP13Q92995 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP13Q92995 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.56■□□□□ 0.88
USP13Q92995 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.56■□□□□ 0.88
USP13Q92995 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP13Q92995 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.56■□□□□ 0.88
USP13Q92995 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP13Q92995 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP13Q92995 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP13Q92995 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP13Q92995 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP13Q92995 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP13Q92995 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.56■□□□□ 0.88
USP13Q92995 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.56■□□□□ 0.88
USP13Q92995 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.55■□□□□ 0.88
USP13Q92995 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP13Q92995 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP13Q92995 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
USP13Q92995 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.55■□□□□ 0.88
USP13Q92995 AC092720.2-201ENST00000602388 1665 ntBASIC20.55■□□□□ 0.88
USP13Q92995 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP13Q92995 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
USP13Q92995 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms