Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC25.86■■□□□ 1.73
RAPGEF4Q8WZA2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
RAPGEF4Q8WZA2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RAPGEF4Q8WZA2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RAPGEF4Q8WZA2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
RAPGEF4Q8WZA2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RAPGEF4Q8WZA2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
RAPGEF4Q8WZA2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RAPGEF4Q8WZA2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC25.86■■□□□ 1.73
RAPGEF4Q8WZA2 TMEM179-206ENST00000616017 1645 ntBASIC25.86■■□□□ 1.73
RAPGEF4Q8WZA2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RAPGEF4Q8WZA2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC25.86■■□□□ 1.73
RAPGEF4Q8WZA2 AC116562.4-202ENST00000641738 218 ntBASIC25.86■■□□□ 1.73
RAPGEF4Q8WZA2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
RAPGEF4Q8WZA2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
RAPGEF4Q8WZA2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RAPGEF4Q8WZA2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RAPGEF4Q8WZA2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
RAPGEF4Q8WZA2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC25.85■■□□□ 1.73
RAPGEF4Q8WZA2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC25.85■■□□□ 1.73
RAPGEF4Q8WZA2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RAPGEF4Q8WZA2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RAPGEF4Q8WZA2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.85■■□□□ 1.73
RAPGEF4Q8WZA2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RAPGEF4Q8WZA2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RAPGEF4Q8WZA2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
RAPGEF4Q8WZA2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RAPGEF4Q8WZA2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.84■■□□□ 1.73
RAPGEF4Q8WZA2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RAPGEF4Q8WZA2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
RAPGEF4Q8WZA2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC25.84■■□□□ 1.73
RAPGEF4Q8WZA2 CCR12P-201ENST00000446203 998 ntBASIC25.84■■□□□ 1.73
RAPGEF4Q8WZA2 AC022616.7-201ENST00000525383 220 ntBASIC25.84■■□□□ 1.73
RAPGEF4Q8WZA2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC25.84■■□□□ 1.73
RAPGEF4Q8WZA2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC25.84■■□□□ 1.73
RAPGEF4Q8WZA2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RAPGEF4Q8WZA2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RAPGEF4Q8WZA2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RAPGEF4Q8WZA2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RAPGEF4Q8WZA2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 AC091390.4-202ENST00000476426 537 ntBASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 AC063952.2-201ENST00000498792 1227 ntBASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 LINC01238-205ENST00000567549 1107 ntBASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC25.83■■□□□ 1.73
RAPGEF4Q8WZA2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
RAPGEF4Q8WZA2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
RAPGEF4Q8WZA2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
RAPGEF4Q8WZA2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
RAPGEF4Q8WZA2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
RAPGEF4Q8WZA2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RAPGEF4Q8WZA2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC25.82■■□□□ 1.72
RAPGEF4Q8WZA2 AC117947.1-201ENST00000427448 529 ntBASIC25.82■■□□□ 1.72
RAPGEF4Q8WZA2 SLC25A1P2-201ENST00000430693 912 ntBASIC25.82■■□□□ 1.72
RAPGEF4Q8WZA2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC25.82■■□□□ 1.72
RAPGEF4Q8WZA2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC25.82■■□□□ 1.72
RAPGEF4Q8WZA2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC25.82■■□□□ 1.72
RAPGEF4Q8WZA2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC25.82■■□□□ 1.72
RAPGEF4Q8WZA2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.82■■□□□ 1.72
RAPGEF4Q8WZA2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.82■■□□□ 1.72
RAPGEF4Q8WZA2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC25.82■■□□□ 1.72
RAPGEF4Q8WZA2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 Z85996.1-201ENST00000494644 937 ntBASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.81■■□□□ 1.72
RAPGEF4Q8WZA2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms