Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BEST2Q8NFU1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
BEST2Q8NFU1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 AP002982.1-201ENST00000492365 877 ntBASIC21.18■□□□□ 0.98
BEST2Q8NFU1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 AC009237.14-201ENST00000609975 1594 ntBASIC21.18■□□□□ 0.98
BEST2Q8NFU1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST2Q8NFU1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BEST2Q8NFU1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
BEST2Q8NFU1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BEST2Q8NFU1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BEST2Q8NFU1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BEST2Q8NFU1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.17■□□□□ 0.98
BEST2Q8NFU1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.17■□□□□ 0.98
BEST2Q8NFU1 AC113410.3-201ENST00000623366 203 ntBASIC21.17■□□□□ 0.98
BEST2Q8NFU1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.17■□□□□ 0.98
BEST2Q8NFU1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BEST2Q8NFU1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BEST2Q8NFU1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BEST2Q8NFU1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.17■□□□□ 0.98
BEST2Q8NFU1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.17■□□□□ 0.98
BEST2Q8NFU1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
BEST2Q8NFU1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BEST2Q8NFU1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.16■□□□□ 0.98
BEST2Q8NFU1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
BEST2Q8NFU1 TMEM179-206ENST00000616017 1645 ntBASIC21.16■□□□□ 0.98
BEST2Q8NFU1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.16■□□□□ 0.98
BEST2Q8NFU1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BEST2Q8NFU1 C1QL1P1-201ENST00000568105 661 ntBASIC21.16■□□□□ 0.98
BEST2Q8NFU1 AC073195.1-201ENST00000607241 877 ntBASIC21.16■□□□□ 0.98
BEST2Q8NFU1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BEST2Q8NFU1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BEST2Q8NFU1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.16■□□□□ 0.98
BEST2Q8NFU1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
BEST2Q8NFU1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.16■□□□□ 0.98
BEST2Q8NFU1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.15■□□□□ 0.98
BEST2Q8NFU1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 AL353708.3-201ENST00000610272 989 ntBASIC21.15■□□□□ 0.98
BEST2Q8NFU1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.15■□□□□ 0.98
BEST2Q8NFU1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
BEST2Q8NFU1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.14■□□□□ 0.98
BEST2Q8NFU1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BEST2Q8NFU1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BEST2Q8NFU1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BEST2Q8NFU1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BEST2Q8NFU1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.14■□□□□ 0.97
BEST2Q8NFU1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.14■□□□□ 0.97
BEST2Q8NFU1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
BEST2Q8NFU1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BEST2Q8NFU1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.14■□□□□ 0.97
BEST2Q8NFU1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
BEST2Q8NFU1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BEST2Q8NFU1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.14■□□□□ 0.97
BEST2Q8NFU1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
BEST2Q8NFU1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
BEST2Q8NFU1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
BEST2Q8NFU1 TCF3P1-201ENST00000423021 1937 ntBASIC21.14■□□□□ 0.97
BEST2Q8NFU1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BEST2Q8NFU1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BEST2Q8NFU1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms