Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC24.29■■□□□ 1.48
RTL9Q8NET4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
RTL9Q8NET4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC24.29■■□□□ 1.48
RTL9Q8NET4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTL9Q8NET4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC24.29■■□□□ 1.48
RTL9Q8NET4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTL9Q8NET4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC24.29■■□□□ 1.48
RTL9Q8NET4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RTL9Q8NET4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTL9Q8NET4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTL9Q8NET4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC24.29■■□□□ 1.48
RTL9Q8NET4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTL9Q8NET4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTL9Q8NET4 TERF1P1-201ENST00000311003 1181 ntBASIC24.29■■□□□ 1.48
RTL9Q8NET4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC24.29■■□□□ 1.48
RTL9Q8NET4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RTL9Q8NET4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.29■■□□□ 1.48
RTL9Q8NET4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RTL9Q8NET4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC24.29■■□□□ 1.48
RTL9Q8NET4 AL590326.2-201ENST00000625139 305 ntBASIC24.29■■□□□ 1.48
RTL9Q8NET4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTL9Q8NET4 AC073508.3-201ENST00000619697 1419 ntBASIC24.28■■□□□ 1.48
RTL9Q8NET4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
RTL9Q8NET4 LINC01568-207ENST00000641790 1380 ntBASIC24.28■■□□□ 1.48
RTL9Q8NET4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
RTL9Q8NET4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.28■■□□□ 1.48
RTL9Q8NET4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
RTL9Q8NET4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTL9Q8NET4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC24.28■■□□□ 1.48
RTL9Q8NET4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC24.28■■□□□ 1.48
RTL9Q8NET4 RCC2P6-201ENST00000526625 1557 ntBASIC24.28■■□□□ 1.48
RTL9Q8NET4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC24.28■■□□□ 1.48
RTL9Q8NET4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC24.28■■□□□ 1.48
RTL9Q8NET4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTL9Q8NET4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTL9Q8NET4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTL9Q8NET4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
RTL9Q8NET4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTL9Q8NET4 AP005212.1-201ENST00000581547 1997 ntBASIC24.27■■□□□ 1.48
RTL9Q8NET4 KRT8P8-201ENST00000434750 1448 ntBASIC24.27■■□□□ 1.48
RTL9Q8NET4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTL9Q8NET4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTL9Q8NET4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC24.27■■□□□ 1.48
RTL9Q8NET4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC24.27■■□□□ 1.48
RTL9Q8NET4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC24.27■■□□□ 1.48
RTL9Q8NET4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
RTL9Q8NET4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC24.27■■□□□ 1.48
RTL9Q8NET4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTL9Q8NET4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.27■■□□□ 1.48
RTL9Q8NET4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTL9Q8NET4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTL9Q8NET4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTL9Q8NET4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTL9Q8NET4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.26■■□□□ 1.47
RTL9Q8NET4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.26■■□□□ 1.47
RTL9Q8NET4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTL9Q8NET4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC24.26■■□□□ 1.47
RTL9Q8NET4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTL9Q8NET4 NME1-207ENST00000480143 964 ntTSL 2 BASIC24.26■■□□□ 1.47
RTL9Q8NET4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTL9Q8NET4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.26■■□□□ 1.47
RTL9Q8NET4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.26■■□□□ 1.47
RTL9Q8NET4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTL9Q8NET4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC24.26■■□□□ 1.47
RTL9Q8NET4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTL9Q8NET4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC24.26■■□□□ 1.47
RTL9Q8NET4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTL9Q8NET4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC24.26■■□□□ 1.47
RTL9Q8NET4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTL9Q8NET4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTL9Q8NET4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.25■■□□□ 1.47
RTL9Q8NET4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTL9Q8NET4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTL9Q8NET4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
RTL9Q8NET4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTL9Q8NET4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC24.25■■□□□ 1.47
RTL9Q8NET4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC24.25■■□□□ 1.47
RTL9Q8NET4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
RTL9Q8NET4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
RTL9Q8NET4 GRAMD4P8-201ENST00000605465 1115 ntBASIC24.25■■□□□ 1.47
RTL9Q8NET4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTL9Q8NET4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTL9Q8NET4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTL9Q8NET4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC24.25■■□□□ 1.47
RTL9Q8NET4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTL9Q8NET4 AC073314.1-201ENST00000568729 2216 ntBASIC24.25■■□□□ 1.47
RTL9Q8NET4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTL9Q8NET4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RTL9Q8NET4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RTL9Q8NET4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTL9Q8NET4 CLDN5-201ENST00000403084 2357 ntBASIC24.24■■□□□ 1.47
RTL9Q8NET4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RTL9Q8NET4 GOLGA2P11-201ENST00000562660 1621 ntBASIC24.24■■□□□ 1.47
RTL9Q8NET4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC24.24■■□□□ 1.47
RTL9Q8NET4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTL9Q8NET4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTL9Q8NET4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTL9Q8NET4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC24.24■■□□□ 1.47
RTL9Q8NET4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC24.24■■□□□ 1.47
RTL9Q8NET4 Z85996.1-201ENST00000494644 937 ntBASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms