Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB42Q8N4Z0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB42Q8N4Z0 AP006587.1-201ENST00000534129 1502 ntBASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 TFP1-202ENST00000475455 1573 ntBASIC19.15■□□□□ 0.66
RAB42Q8N4Z0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB42Q8N4Z0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RAB42Q8N4Z0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB42Q8N4Z0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.14■□□□□ 0.66
RAB42Q8N4Z0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 AC239809.2-201ENST00000415381 517 ntBASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB42Q8N4Z0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 MTDHP1-201ENST00000605323 784 ntBASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 AC004264.1-201ENST00000608354 794 ntBASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB42Q8N4Z0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RAB42Q8N4Z0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB42Q8N4Z0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB42Q8N4Z0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.12■□□□□ 0.65
RAB42Q8N4Z0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAB42Q8N4Z0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.12■□□□□ 0.65
RAB42Q8N4Z0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB42Q8N4Z0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
RAB42Q8N4Z0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.12■□□□□ 0.65
RAB42Q8N4Z0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAB42Q8N4Z0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.12■□□□□ 0.65
RAB42Q8N4Z0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.12■□□□□ 0.65
RAB42Q8N4Z0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.12■□□□□ 0.65
RAB42Q8N4Z0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 225 ms