Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 C1QL1P1-201ENST00000568105 661 ntBASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 HTR7P1-201ENST00000538670 1336 ntBASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 AL353708.3-201ENST00000610272 989 ntBASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.61■□□□□ 0.57
ARHGEF39Q8N4T4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 AF186192.3-201ENST00000583427 947 ntBASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ARHGEF39Q8N4T4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 AL135905.2-201ENST00000584934 1404 ntBASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 AL596275.1-201ENST00000423464 877 ntBASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 AC113410.3-201ENST00000623366 203 ntBASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ARHGEF39Q8N4T4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARHGEF39Q8N4T4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ARHGEF39Q8N4T4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARHGEF39Q8N4T4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARHGEF39Q8N4T4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARHGEF39Q8N4T4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ARHGEF39Q8N4T4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARHGEF39Q8N4T4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ARHGEF39Q8N4T4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
ARHGEF39Q8N4T4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.58■□□□□ 0.57
ARHGEF39Q8N4T4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.58■□□□□ 0.57
ARHGEF39Q8N4T4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ARHGEF39Q8N4T4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARHGEF39Q8N4T4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARHGEF39Q8N4T4 TUBB8P6-201ENST00000436895 1288 ntBASIC18.58■□□□□ 0.56
ARHGEF39Q8N4T4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.58■□□□□ 0.56
ARHGEF39Q8N4T4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms