Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHPFQ8IZ52 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHPFQ8IZ52 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
CHPFQ8IZ52 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.04■□□□□ 0.8
CHPFQ8IZ52 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHPFQ8IZ52 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHPFQ8IZ52 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHPFQ8IZ52 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHPFQ8IZ52 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.04■□□□□ 0.8
CHPFQ8IZ52 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHPFQ8IZ52 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHPFQ8IZ52 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHPFQ8IZ52 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHPFQ8IZ52 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 MIR6786-201ENST00000616843 113 ntBASIC20.03■□□□□ 0.8
CHPFQ8IZ52 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 AC018553.1-201ENST00000616682 1458 ntBASIC20.03■□□□□ 0.8
CHPFQ8IZ52 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.03■□□□□ 0.8
CHPFQ8IZ52 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 TFP1-202ENST00000475455 1573 ntBASIC20.02■□□□□ 0.8
CHPFQ8IZ52 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHPFQ8IZ52 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHPFQ8IZ52 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHPFQ8IZ52 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHPFQ8IZ52 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CHPFQ8IZ52 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 AC116562.2-201ENST00000507042 360 ntBASIC20.01■□□□□ 0.79
CHPFQ8IZ52 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 C1QL1P1-201ENST00000568105 661 ntBASIC20.01■□□□□ 0.79
CHPFQ8IZ52 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 KRT8P9-201ENST00000558927 1449 ntBASIC20.01■□□□□ 0.79
CHPFQ8IZ52 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHPFQ8IZ52 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHPFQ8IZ52 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20■□□□□ 0.79
CHPFQ8IZ52 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CHPFQ8IZ52 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20■□□□□ 0.79
CHPFQ8IZ52 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CHPFQ8IZ52 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHPFQ8IZ52 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CHPFQ8IZ52 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHPFQ8IZ52 YBX1P10-201ENST00000444752 975 ntBASIC20■□□□□ 0.79
CHPFQ8IZ52 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20■□□□□ 0.79
CHPFQ8IZ52 AC145285.6-201ENST00000604632 637 ntBASIC20■□□□□ 0.79
CHPFQ8IZ52 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHPFQ8IZ52 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20■□□□□ 0.79
CHPFQ8IZ52 AL031985.4-201ENST00000642138 673 ntBASIC20■□□□□ 0.79
CHPFQ8IZ52 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms