Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 AC026471.5-201ENST00000615068 467 ntBASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.75■□□□□ 0.91
SCN4BQ8IWT1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 AL162377.1-201ENST00000618844 1793 ntBASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 TUBB8P6-201ENST00000436895 1288 ntBASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 AL355355.2-201ENST00000442321 338 ntBASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.74■□□□□ 0.91
SCN4BQ8IWT1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 AL691432.2-201ENST00000607222 2038 ntBASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 TSPY15P-201ENST00000457163 923 ntBASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 CR392000.1-201ENST00000624770 1228 ntBASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN4BQ8IWT1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms