Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.59■□□□□ 0.89
ALYREFQ86V81 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ALYREFQ86V81 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ALYREFQ86V81 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.59■□□□□ 0.89
ALYREFQ86V81 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ALYREFQ86V81 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ALYREFQ86V81 FAM197Y1-201ENST00000421178 764 ntBASIC20.59■□□□□ 0.89
ALYREFQ86V81 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 AC022616.7-201ENST00000525383 220 ntBASIC20.59■□□□□ 0.89
ALYREFQ86V81 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.59■□□□□ 0.89
ALYREFQ86V81 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.59■□□□□ 0.89
ALYREFQ86V81 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.59■□□□□ 0.89
ALYREFQ86V81 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.59■□□□□ 0.89
ALYREFQ86V81 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ALYREFQ86V81 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 PLK5-205ENST00000642079 1969 ntBASIC20.59■□□□□ 0.89
ALYREFQ86V81 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 AC027702.1-201ENST00000563810 1770 ntBASIC20.59■□□□□ 0.89
ALYREFQ86V81 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ALYREFQ86V81 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ALYREFQ86V81 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ALYREFQ86V81 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
ALYREFQ86V81 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.58■□□□□ 0.89
ALYREFQ86V81 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ALYREFQ86V81 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ALYREFQ86V81 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
ALYREFQ86V81 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
ALYREFQ86V81 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.58■□□□□ 0.89
ALYREFQ86V81 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.58■□□□□ 0.89
ALYREFQ86V81 BX664615.1-201ENST00000443558 458 ntBASIC20.58■□□□□ 0.89
ALYREFQ86V81 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.58■□□□□ 0.89
ALYREFQ86V81 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ALYREFQ86V81 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.58■□□□□ 0.89
ALYREFQ86V81 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ALYREFQ86V81 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.58■□□□□ 0.89
ALYREFQ86V81 AL034346.1-201ENST00000568244 1277 ntBASIC20.58■□□□□ 0.89
ALYREFQ86V81 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
ALYREFQ86V81 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.58■□□□□ 0.89
ALYREFQ86V81 AC010947.1-201ENST00000623454 693 ntBASIC20.58■□□□□ 0.89
ALYREFQ86V81 AC003102.1-202ENST00000563394 1796 ntBASIC20.58■□□□□ 0.89
ALYREFQ86V81 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.58■□□□□ 0.88
ALYREFQ86V81 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
ALYREFQ86V81 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.58■□□□□ 0.88
ALYREFQ86V81 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ALYREFQ86V81 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
ALYREFQ86V81 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ALYREFQ86V81 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ALYREFQ86V81 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.58■□□□□ 0.88
ALYREFQ86V81 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALYREFQ86V81 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.57■□□□□ 0.88
ALYREFQ86V81 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.57■□□□□ 0.88
ALYREFQ86V81 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.57■□□□□ 0.88
ALYREFQ86V81 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.57■□□□□ 0.88
ALYREFQ86V81 AK4P3-201ENST00000418260 669 ntBASIC20.57■□□□□ 0.88
ALYREFQ86V81 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.57■□□□□ 0.88
ALYREFQ86V81 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.57■□□□□ 0.88
ALYREFQ86V81 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.57■□□□□ 0.88
ALYREFQ86V81 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.57■□□□□ 0.88
ALYREFQ86V81 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALYREFQ86V81 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALYREFQ86V81 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALYREFQ86V81 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.57■□□□□ 0.88
ALYREFQ86V81 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALYREFQ86V81 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ALYREFQ86V81 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALYREFQ86V81 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ALYREFQ86V81 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ALYREFQ86V81 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
ALYREFQ86V81 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALYREFQ86V81 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ALYREFQ86V81 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALYREFQ86V81 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.56■□□□□ 0.88
ALYREFQ86V81 AC087633.2-202ENST00000565166 1439 ntBASIC20.56■□□□□ 0.88
ALYREFQ86V81 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
ALYREFQ86V81 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.56■□□□□ 0.88
ALYREFQ86V81 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALYREFQ86V81 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALYREFQ86V81 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ALYREFQ86V81 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.56■□□□□ 0.88
ALYREFQ86V81 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ALYREFQ86V81 AF186192.3-201ENST00000583427 947 ntBASIC20.56■□□□□ 0.88
ALYREFQ86V81 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.56■□□□□ 0.88
ALYREFQ86V81 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALYREFQ86V81 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALYREFQ86V81 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.56■□□□□ 0.88
ALYREFQ86V81 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALYREFQ86V81 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ALYREFQ86V81 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ALYREFQ86V81 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms