Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
COLCA1Q6ZS62 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COLCA1Q6ZS62 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 YBX1P10-201ENST00000444752 975 ntBASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 AC026366.1-201ENST00000488803 879 ntBASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 AP003097.1-201ENST00000530657 1135 ntBASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 AP006587.1-201ENST00000534129 1502 ntBASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.95■□□□□ 0.3
COLCA1Q6ZS62 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.94■□□□□ 0.3
COLCA1Q6ZS62 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COLCA1Q6ZS62 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COLCA1Q6ZS62 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
COLCA1Q6ZS62 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
COLCA1Q6ZS62 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COLCA1Q6ZS62 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COLCA1Q6ZS62 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.92■□□□□ 0.3
COLCA1Q6ZS62 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COLCA1Q6ZS62 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COLCA1Q6ZS62 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COLCA1Q6ZS62 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COLCA1Q6ZS62 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.92■□□□□ 0.3
COLCA1Q6ZS62 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms