Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 SMG8-203ENST00000578922 2178 ntBASIC20.97■□□□□ 0.95
VSTM1Q6UX27 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 AL135905.2-201ENST00000584934 1404 ntBASIC20.96■□□□□ 0.95
VSTM1Q6UX27 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 RARRES2P10-201ENST00000564312 460 ntBASIC20.96■□□□□ 0.95
VSTM1Q6UX27 Z99916.2-201ENST00000604037 246 ntBASIC20.96■□□□□ 0.95
VSTM1Q6UX27 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VSTM1Q6UX27 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 AL512408.1-201ENST00000569378 2000 ntBASIC20.95■□□□□ 0.94
VSTM1Q6UX27 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 KRT16P5-201ENST00000455284 522 ntBASIC20.95■□□□□ 0.94
VSTM1Q6UX27 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VSTM1Q6UX27 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 AC233702.5-201ENST00000584107 538 ntBASIC20.94■□□□□ 0.94
VSTM1Q6UX27 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VSTM1Q6UX27 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 AC116351.2-201ENST00000606540 1585 ntBASIC20.93■□□□□ 0.94
VSTM1Q6UX27 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 RPS2P55-201ENST00000397318 883 ntBASIC20.93■□□□□ 0.94
VSTM1Q6UX27 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 AL596275.1-201ENST00000423464 877 ntBASIC20.93■□□□□ 0.94
VSTM1Q6UX27 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 AC107956.1-201ENST00000494359 873 ntBASIC20.93■□□□□ 0.94
VSTM1Q6UX27 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 AC004264.1-201ENST00000608354 794 ntBASIC20.93■□□□□ 0.94
VSTM1Q6UX27 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.93■□□□□ 0.94
VSTM1Q6UX27 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VSTM1Q6UX27 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VSTM1Q6UX27 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VSTM1Q6UX27 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VSTM1Q6UX27 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VSTM1Q6UX27 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VSTM1Q6UX27 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
VSTM1Q6UX27 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
VSTM1Q6UX27 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms