Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 PRORSD1P-201ENST00000295112 541 ntBASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 PRKY-204ENST00000533551 1019 ntBASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R3AQ6IN85 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PPP4R3AQ6IN85 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PPP4R3AQ6IN85 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.35■■□□□ 1.17
PPP4R3AQ6IN85 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC22.35■■□□□ 1.17
PPP4R3AQ6IN85 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
PPP4R3AQ6IN85 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PPP4R3AQ6IN85 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PPP4R3AQ6IN85 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.35■■□□□ 1.17
PPP4R3AQ6IN85 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.35■■□□□ 1.17
PPP4R3AQ6IN85 AC133681.1-201ENST00000465482 601 ntBASIC22.35■■□□□ 1.17
PPP4R3AQ6IN85 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.35■■□□□ 1.17
PPP4R3AQ6IN85 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PPP4R3AQ6IN85 AP006587.1-201ENST00000534129 1502 ntBASIC22.35■■□□□ 1.17
PPP4R3AQ6IN85 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
PPP4R3AQ6IN85 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 AL023875.1-201ENST00000640777 796 ntBASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
PPP4R3AQ6IN85 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 AC124016.1-201ENST00000609552 612 ntBASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.33■■□□□ 1.17
PPP4R3AQ6IN85 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.33■■□□□ 1.16
PPP4R3AQ6IN85 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
PPP4R3AQ6IN85 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.33■■□□□ 1.16
PPP4R3AQ6IN85 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PPP4R3AQ6IN85 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.33■■□□□ 1.16
PPP4R3AQ6IN85 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.33■■□□□ 1.16
PPP4R3AQ6IN85 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.32■■□□□ 1.16
PPP4R3AQ6IN85 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms