Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC32.38■■■□□ 2.77
SNAPC4Q5SXM2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
SNAPC4Q5SXM2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SNAPC4Q5SXM2 KRT8P45-201ENST00000414328 1447 ntBASIC32.38■■■□□ 2.77
SNAPC4Q5SXM2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SNAPC4Q5SXM2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
SNAPC4Q5SXM2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SNAPC4Q5SXM2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
SNAPC4Q5SXM2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC32.37■■■□□ 2.77
SNAPC4Q5SXM2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
SNAPC4Q5SXM2 AP003041.3-201ENST00000527151 707 ntBASIC32.37■■■□□ 2.77
SNAPC4Q5SXM2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC32.37■■■□□ 2.77
SNAPC4Q5SXM2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC32.37■■■□□ 2.77
SNAPC4Q5SXM2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
SNAPC4Q5SXM2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC32.36■■■□□ 2.77
SNAPC4Q5SXM2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC32.36■■■□□ 2.77
SNAPC4Q5SXM2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC32.36■■■□□ 2.77
SNAPC4Q5SXM2 AC092119.3-201ENST00000612618 583 ntBASIC32.36■■■□□ 2.77
SNAPC4Q5SXM2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC32.36■■■□□ 2.77
SNAPC4Q5SXM2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
SNAPC4Q5SXM2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC32.36■■■□□ 2.77
SNAPC4Q5SXM2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC32.36■■■□□ 2.77
SNAPC4Q5SXM2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC32.36■■■□□ 2.77
SNAPC4Q5SXM2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
SNAPC4Q5SXM2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
SNAPC4Q5SXM2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC32.35■■■□□ 2.77
SNAPC4Q5SXM2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
SNAPC4Q5SXM2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC32.35■■■□□ 2.77
SNAPC4Q5SXM2 CA15P1-201ENST00000481698 905 ntBASIC32.35■■■□□ 2.77
SNAPC4Q5SXM2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC32.35■■■□□ 2.77
SNAPC4Q5SXM2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
SNAPC4Q5SXM2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
SNAPC4Q5SXM2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC32.35■■■□□ 2.77
SNAPC4Q5SXM2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
SNAPC4Q5SXM2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC32.35■■■□□ 2.77
SNAPC4Q5SXM2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC32.35■■■□□ 2.77
SNAPC4Q5SXM2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC32.35■■■□□ 2.77
SNAPC4Q5SXM2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
SNAPC4Q5SXM2 CR769767.2-201ENST00000622735 460 ntBASIC32.35■■■□□ 2.77
SNAPC4Q5SXM2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC32.34■■■□□ 2.77
SNAPC4Q5SXM2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
SNAPC4Q5SXM2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
SNAPC4Q5SXM2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
SNAPC4Q5SXM2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
SNAPC4Q5SXM2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
SNAPC4Q5SXM2 KRT17P6-201ENST00000453795 1220 ntBASIC32.34■■■□□ 2.77
SNAPC4Q5SXM2 AC111152.3-201ENST00000569699 673 ntBASIC32.34■■■□□ 2.77
SNAPC4Q5SXM2 AC233723.2-201ENST00000623798 2106 ntBASIC32.34■■■□□ 2.77
SNAPC4Q5SXM2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC32.34■■■□□ 2.77
SNAPC4Q5SXM2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
SNAPC4Q5SXM2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC32.33■■■□□ 2.77
SNAPC4Q5SXM2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
SNAPC4Q5SXM2 PRELID1P1-202ENST00000567272 903 ntBASIC32.33■■■□□ 2.77
SNAPC4Q5SXM2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
SNAPC4Q5SXM2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
SNAPC4Q5SXM2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
SNAPC4Q5SXM2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
SNAPC4Q5SXM2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
SNAPC4Q5SXM2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
SNAPC4Q5SXM2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SNAPC4Q5SXM2 STARP1-201ENST00000397973 869 ntBASIC32.32■■■□□ 2.76
SNAPC4Q5SXM2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC32.32■■■□□ 2.76
SNAPC4Q5SXM2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC32.32■■■□□ 2.76
SNAPC4Q5SXM2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC32.32■■■□□ 2.76
SNAPC4Q5SXM2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
SNAPC4Q5SXM2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC32.31■■■□□ 2.76
SNAPC4Q5SXM2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC32.31■■■□□ 2.76
SNAPC4Q5SXM2 AL121603.2-201ENST00000557373 2117 ntBASIC32.31■■■□□ 2.76
SNAPC4Q5SXM2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
SNAPC4Q5SXM2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
SNAPC4Q5SXM2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC32.3■■■□□ 2.76
SNAPC4Q5SXM2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC32.3■■■□□ 2.76
SNAPC4Q5SXM2 AC140113.3-201ENST00000605663 199 ntBASIC32.3■■■□□ 2.76
SNAPC4Q5SXM2 AC006538.3-201ENST00000612495 578 ntBASIC32.3■■■□□ 2.76
SNAPC4Q5SXM2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
SNAPC4Q5SXM2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
SNAPC4Q5SXM2 LINC01311-201ENST00000565162 1445 ntBASIC32.3■■■□□ 2.76
SNAPC4Q5SXM2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SNAPC4Q5SXM2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
SNAPC4Q5SXM2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SNAPC4Q5SXM2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SNAPC4Q5SXM2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC32.29■■■□□ 2.76
SNAPC4Q5SXM2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SNAPC4Q5SXM2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SNAPC4Q5SXM2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC32.29■■■□□ 2.76
SNAPC4Q5SXM2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC32.29■■■□□ 2.76
SNAPC4Q5SXM2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
SNAPC4Q5SXM2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SNAPC4Q5SXM2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC32.29■■■□□ 2.76
SNAPC4Q5SXM2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SNAPC4Q5SXM2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SNAPC4Q5SXM2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC32.29■■■□□ 2.76
SNAPC4Q5SXM2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SNAPC4Q5SXM2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC32.29■■■□□ 2.76
SNAPC4Q5SXM2 GPALPP1-207ENST00000611650 899 ntBASIC32.29■■■□□ 2.76
SNAPC4Q5SXM2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
SNAPC4Q5SXM2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
SNAPC4Q5SXM2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SNAPC4Q5SXM2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
SNAPC4Q5SXM2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms