Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.61■□□□□ 0.41
H3F3AP84243 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.61■□□□□ 0.41
H3F3AP84243 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.61■□□□□ 0.41
H3F3AP84243 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.61■□□□□ 0.41
H3F3AP84243 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.61■□□□□ 0.41
H3F3AP84243 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.61■□□□□ 0.41
H3F3AP84243 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.61■□□□□ 0.41
H3F3AP84243 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
H3F3AP84243 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.61■□□□□ 0.41
H3F3AP84243 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3F3AP84243 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3AP84243 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.6■□□□□ 0.41
H3F3AP84243 AC125437.2-201ENST00000625180 2167 ntBASIC17.6■□□□□ 0.41
H3F3AP84243 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.6■□□□□ 0.41
H3F3AP84243 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3AP84243 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3AP84243 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3AP84243 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.6■□□□□ 0.41
H3F3AP84243 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3AP84243 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
H3F3AP84243 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.6■□□□□ 0.41
H3F3AP84243 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3AP84243 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.6■□□□□ 0.41
H3F3AP84243 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.6■□□□□ 0.41
H3F3AP84243 RN7SL471P-201ENST00000580476 299 ntBASIC17.6■□□□□ 0.41
H3F3AP84243 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3AP84243 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3AP84243 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3AP84243 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
H3F3AP84243 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
H3F3AP84243 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3AP84243 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.6■□□□□ 0.41
H3F3AP84243 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3AP84243 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
H3F3AP84243 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3AP84243 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
H3F3AP84243 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3AP84243 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3F3AP84243 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3AP84243 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3AP84243 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
H3F3AP84243 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3AP84243 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
H3F3AP84243 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3AP84243 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3AP84243 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3AP84243 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.59■□□□□ 0.41
H3F3AP84243 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.59■□□□□ 0.41
H3F3AP84243 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3AP84243 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3F3AP84243 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
H3F3AP84243 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
H3F3AP84243 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
H3F3AP84243 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
H3F3AP84243 AP006587.1-201ENST00000534129 1502 ntBASIC17.58■□□□□ 0.41
H3F3AP84243 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
H3F3AP84243 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
H3F3AP84243 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
H3F3AP84243 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.58■□□□□ 0.41
H3F3AP84243 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
H3F3AP84243 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
H3F3AP84243 ABHD17AP1-201ENST00000358206 933 ntBASIC17.58■□□□□ 0.4
H3F3AP84243 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
H3F3AP84243 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
H3F3AP84243 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.58■□□□□ 0.4
H3F3AP84243 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
H3F3AP84243 PRKY-204ENST00000533551 1019 ntBASIC17.58■□□□□ 0.4
H3F3AP84243 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.58■□□□□ 0.4
H3F3AP84243 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.58■□□□□ 0.4
H3F3AP84243 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H3F3AP84243 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H3F3AP84243 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
H3F3AP84243 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
H3F3AP84243 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H3F3AP84243 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.58■□□□□ 0.4
H3F3AP84243 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
H3F3AP84243 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H3F3AP84243 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
H3F3AP84243 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
H3F3AP84243 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H3F3AP84243 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H3F3AP84243 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
H3F3AP84243 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H3F3AP84243 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.57■□□□□ 0.4
H3F3AP84243 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H3F3AP84243 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.57■□□□□ 0.4
H3F3AP84243 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.57■□□□□ 0.4
H3F3AP84243 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.57■□□□□ 0.4
H3F3AP84243 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms