Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.7■□□□□ 0.9
USP46P62068 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.7■□□□□ 0.9
USP46P62068 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP46P62068 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP46P62068 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.7■□□□□ 0.9
USP46P62068 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP46P62068 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP46P62068 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
USP46P62068 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
USP46P62068 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.69■□□□□ 0.9
USP46P62068 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
USP46P62068 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP46P62068 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP46P62068 FAM197Y1-201ENST00000421178 764 ntBASIC20.69■□□□□ 0.9
USP46P62068 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP46P62068 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP46P62068 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP46P62068 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP46P62068 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.69■□□□□ 0.9
USP46P62068 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.69■□□□□ 0.9
USP46P62068 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP46P62068 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.69■□□□□ 0.9
USP46P62068 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP46P62068 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.69■□□□□ 0.9
USP46P62068 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP46P62068 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.69■□□□□ 0.9
USP46P62068 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP46P62068 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP46P62068 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP46P62068 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
USP46P62068 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP46P62068 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.69■□□□□ 0.9
USP46P62068 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP46P62068 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USP46P62068 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
USP46P62068 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP46P62068 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
USP46P62068 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.68■□□□□ 0.9
USP46P62068 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP46P62068 AC007952.6-201ENST00000573168 2673 ntBASIC20.68■□□□□ 0.9
USP46P62068 AC003957.1-201ENST00000625108 2673 ntBASIC20.68■□□□□ 0.9
USP46P62068 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.68■□□□□ 0.9
USP46P62068 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP46P62068 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
USP46P62068 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP46P62068 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP46P62068 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.68■□□□□ 0.9
USP46P62068 CD177P1-201ENST00000606252 935 ntBASIC20.68■□□□□ 0.9
USP46P62068 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.68■□□□□ 0.9
USP46P62068 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.68■□□□□ 0.9
USP46P62068 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.68■□□□□ 0.9
USP46P62068 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
USP46P62068 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.68■□□□□ 0.9
USP46P62068 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.68■□□□□ 0.9
USP46P62068 LINC01006-201ENST00000333319 2292 ntBASIC20.67■□□□□ 0.9
USP46P62068 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.67■□□□□ 0.9
USP46P62068 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.67■□□□□ 0.9
USP46P62068 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP46P62068 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP46P62068 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.67■□□□□ 0.9
USP46P62068 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP46P62068 AL691432.2-201ENST00000607222 2038 ntBASIC20.67■□□□□ 0.9
USP46P62068 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.67■□□□□ 0.9
USP46P62068 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.67■□□□□ 0.9
USP46P62068 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP46P62068 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.67■□□□□ 0.9
USP46P62068 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.67■□□□□ 0.9
USP46P62068 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.67■□□□□ 0.9
USP46P62068 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP46P62068 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.67■□□□□ 0.9
USP46P62068 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP46P62068 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
USP46P62068 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.67■□□□□ 0.9
USP46P62068 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP46P62068 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.67■□□□□ 0.9
USP46P62068 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP46P62068 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP46P62068 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP46P62068 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
USP46P62068 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP46P62068 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP46P62068 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP46P62068 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP46P62068 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
USP46P62068 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP46P62068 AL353807.1-201ENST00000427475 662 ntBASIC20.66■□□□□ 0.9
USP46P62068 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.66■□□□□ 0.9
USP46P62068 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.66■□□□□ 0.9
USP46P62068 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP46P62068 AL355075.4-201ENST00000554988 638 ntBASIC20.66■□□□□ 0.9
USP46P62068 MIR4785-201ENST00000585005 73 ntBASIC20.66■□□□□ 0.9
USP46P62068 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP46P62068 AC073195.1-201ENST00000607241 877 ntBASIC20.66■□□□□ 0.9
USP46P62068 KRT17P2-201ENST00000300992 1314 ntBASIC20.66■□□□□ 0.9
USP46P62068 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP46P62068 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP46P62068 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP46P62068 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP46P62068 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.66■□□□□ 0.9
USP46P62068 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms