Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ACLYP53396 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.78■■□□□ 1.08
ACLYP53396 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.78■■□□□ 1.08
ACLYP53396 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.78■■□□□ 1.08
ACLYP53396 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ACLYP53396 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACLYP53396 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ACLYP53396 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.77■■□□□ 1.08
ACLYP53396 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ACLYP53396 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.77■■□□□ 1.08
ACLYP53396 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACLYP53396 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.77■■□□□ 1.08
ACLYP53396 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
ACLYP53396 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ACLYP53396 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
ACLYP53396 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.77■■□□□ 1.08
ACLYP53396 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACLYP53396 KRT126P-201ENST00000549467 1181 ntBASIC21.77■■□□□ 1.08
ACLYP53396 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.77■■□□□ 1.08
ACLYP53396 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACLYP53396 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.77■■□□□ 1.08
ACLYP53396 AL023803.3-201ENST00000615559 522 ntBASIC21.77■■□□□ 1.08
ACLYP53396 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACLYP53396 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACLYP53396 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ACLYP53396 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ACLYP53396 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ACLYP53396 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ACLYP53396 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ACLYP53396 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
ACLYP53396 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ACLYP53396 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.76■■□□□ 1.07
ACLYP53396 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ACLYP53396 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.76■■□□□ 1.07
ACLYP53396 Z85996.1-201ENST00000494644 937 ntBASIC21.76■■□□□ 1.07
ACLYP53396 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ACLYP53396 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.76■■□□□ 1.07
ACLYP53396 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ACLYP53396 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.75■■□□□ 1.07
ACLYP53396 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.75■■□□□ 1.07
ACLYP53396 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ACLYP53396 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.75■■□□□ 1.07
ACLYP53396 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.75■■□□□ 1.07
ACLYP53396 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
ACLYP53396 TSPY17P-201ENST00000450329 467 ntBASIC21.75■■□□□ 1.07
ACLYP53396 FAM86EP-206ENST00000510506 987 ntBASIC21.75■■□□□ 1.07
ACLYP53396 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.75■■□□□ 1.07
ACLYP53396 AL121894.2-201ENST00000602977 491 ntBASIC21.75■■□□□ 1.07
ACLYP53396 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.75■■□□□ 1.07
ACLYP53396 AL121956.5-201ENST00000625261 221 ntBASIC21.75■■□□□ 1.07
ACLYP53396 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
ACLYP53396 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ACLYP53396 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACLYP53396 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACLYP53396 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ACLYP53396 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.74■■□□□ 1.07
ACLYP53396 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACLYP53396 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACLYP53396 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.74■■□□□ 1.07
ACLYP53396 PCED1CP-201ENST00000419887 785 ntBASIC21.74■■□□□ 1.07
ACLYP53396 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.74■■□□□ 1.07
ACLYP53396 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACLYP53396 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.74■■□□□ 1.07
ACLYP53396 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.74■■□□□ 1.07
ACLYP53396 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.74■■□□□ 1.07
ACLYP53396 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.74■■□□□ 1.07
ACLYP53396 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.74■■□□□ 1.07
ACLYP53396 AC006128.1-201ENST00000624704 1661 ntBASIC21.74■■□□□ 1.07
ACLYP53396 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
ACLYP53396 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACLYP53396 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACLYP53396 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ACLYP53396 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.74■■□□□ 1.07
ACLYP53396 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.74■■□□□ 1.07
ACLYP53396 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.74■■□□□ 1.07
ACLYP53396 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.74■■□□□ 1.07
ACLYP53396 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.74■■□□□ 1.07
ACLYP53396 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ACLYP53396 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACLYP53396 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACLYP53396 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.73■■□□□ 1.07
ACLYP53396 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACLYP53396 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.73■■□□□ 1.07
ACLYP53396 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.73■■□□□ 1.07
ACLYP53396 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ACLYP53396 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.73■■□□□ 1.07
ACLYP53396 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.73■■□□□ 1.07
ACLYP53396 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.73■■□□□ 1.07
ACLYP53396 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.73■■□□□ 1.07
ACLYP53396 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.73■■□□□ 1.07
ACLYP53396 AL353719.1-201ENST00000566847 864 ntBASIC21.73■■□□□ 1.07
ACLYP53396 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.73■■□□□ 1.07
ACLYP53396 AL031432.5-201ENST00000641059 760 ntBASIC21.73■■□□□ 1.07
ACLYP53396 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
ACLYP53396 AC007225.1-201ENST00000566331 1836 ntBASIC21.73■■□□□ 1.07
ACLYP53396 TMEM179-206ENST00000616017 1645 ntBASIC21.73■■□□□ 1.07
ACLYP53396 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ACLYP53396 AC092720.2-201ENST00000602388 1665 ntBASIC21.72■■□□□ 1.07
ACLYP53396 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ACLYP53396 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms