Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LHX2P50458 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.61■□□□□ 0.41
LHX2P50458 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.61■□□□□ 0.41
LHX2P50458 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.61■□□□□ 0.41
LHX2P50458 LINC01521-201ENST00000504184 1943 ntBASIC17.6■□□□□ 0.41
LHX2P50458 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LHX2P50458 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX2P50458 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX2P50458 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LHX2P50458 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX2P50458 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX2P50458 KSR1P1-201ENST00000446298 240 ntBASIC17.6■□□□□ 0.41
LHX2P50458 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LHX2P50458 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX2P50458 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LHX2P50458 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX2P50458 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX2P50458 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX2P50458 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
LHX2P50458 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LHX2P50458 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX2P50458 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LHX2P50458 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
LHX2P50458 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LHX2P50458 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX2P50458 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.6■□□□□ 0.41
LHX2P50458 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX2P50458 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX2P50458 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX2P50458 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.59■□□□□ 0.41
LHX2P50458 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX2P50458 TCF3P1-201ENST00000423021 1937 ntBASIC17.59■□□□□ 0.41
LHX2P50458 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX2P50458 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX2P50458 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
LHX2P50458 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX2P50458 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LHX2P50458 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX2P50458 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX2P50458 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX2P50458 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX2P50458 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX2P50458 AC026471.5-201ENST00000615068 467 ntBASIC17.59■□□□□ 0.41
LHX2P50458 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX2P50458 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LHX2P50458 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX2P50458 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX2P50458 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX2P50458 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.59■□□□□ 0.41
LHX2P50458 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
LHX2P50458 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LHX2P50458 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
LHX2P50458 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LHX2P50458 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.58■□□□□ 0.41
LHX2P50458 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX2P50458 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX2P50458 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX2P50458 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX2P50458 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.58■□□□□ 0.4
LHX2P50458 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LHX2P50458 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.58■□□□□ 0.4
LHX2P50458 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.58■□□□□ 0.4
LHX2P50458 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX2P50458 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX2P50458 CR392000.1-201ENST00000624770 1228 ntBASIC17.58■□□□□ 0.4
LHX2P50458 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX2P50458 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LHX2P50458 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX2P50458 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX2P50458 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX2P50458 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX2P50458 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX2P50458 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.58■□□□□ 0.4
LHX2P50458 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX2P50458 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX2P50458 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
LHX2P50458 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX2P50458 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX2P50458 KRT16P1-201ENST00000399124 1418 ntBASIC17.57■□□□□ 0.4
LHX2P50458 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.57■□□□□ 0.4
LHX2P50458 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX2P50458 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX2P50458 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.57■□□□□ 0.4
LHX2P50458 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LHX2P50458 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX2P50458 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.57■□□□□ 0.4
LHX2P50458 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX2P50458 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX2P50458 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX2P50458 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX2P50458 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX2P50458 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX2P50458 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.57■□□□□ 0.4
LHX2P50458 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX2P50458 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX2P50458 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LHX2P50458 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX2P50458 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LHX2P50458 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX2P50458 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms