Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1A1P48729 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1A1P48729 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1A1P48729 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1A1P48729 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1A1P48729 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1A1P48729 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1A1P48729 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1A1P48729 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1A1P48729 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1A1P48729 AC124283.5-201ENST00000624661 1809 ntBASIC17.5■□□□□ 0.39
CSNK1A1P48729 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1A1P48729 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1A1P48729 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1A1P48729 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1A1P48729 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.5■□□□□ 0.39
CSNK1A1P48729 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CSNK1A1P48729 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1A1P48729 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CSNK1A1P48729 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CSNK1A1P48729 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1A1P48729 UNC93B5-201ENST00000530315 699 ntBASIC17.49■□□□□ 0.39
CSNK1A1P48729 AC008687.6-201ENST00000596318 630 ntBASIC17.49■□□□□ 0.39
CSNK1A1P48729 AC120498.8-201ENST00000614275 531 ntBASIC17.49■□□□□ 0.39
CSNK1A1P48729 AL121906.2-201ENST00000621597 723 ntBASIC17.49■□□□□ 0.39
CSNK1A1P48729 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.49■□□□□ 0.39
CSNK1A1P48729 AC138932.1-201ENST00000534164 6830 ntBASIC17.49■□□□□ 0.39
CSNK1A1P48729 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CSNK1A1P48729 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CSNK1A1P48729 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1A1P48729 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1A1P48729 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1A1P48729 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1A1P48729 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1A1P48729 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.49■□□□□ 0.39
CSNK1A1P48729 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.49■□□□□ 0.39
CSNK1A1P48729 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1A1P48729 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1A1P48729 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1A1P48729 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1A1P48729 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1A1P48729 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1A1P48729 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.48■□□□□ 0.39
CSNK1A1P48729 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.48■□□□□ 0.39
CSNK1A1P48729 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1A1P48729 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1A1P48729 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.48■□□□□ 0.39
CSNK1A1P48729 UNC93B4-201ENST00000505679 747 ntBASIC17.48■□□□□ 0.39
CSNK1A1P48729 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.48■□□□□ 0.39
CSNK1A1P48729 KRT18P6-201ENST00000555540 1265 ntBASIC17.48■□□□□ 0.39
CSNK1A1P48729 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.48■□□□□ 0.39
CSNK1A1P48729 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.48■□□□□ 0.39
CSNK1A1P48729 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1A1P48729 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1A1P48729 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.48■□□□□ 0.39
CSNK1A1P48729 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1A1P48729 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CSNK1A1P48729 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1A1P48729 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.48■□□□□ 0.39
CSNK1A1P48729 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1A1P48729 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1A1P48729 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CSNK1A1P48729 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.48■□□□□ 0.39
CSNK1A1P48729 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1A1P48729 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1A1P48729 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1A1P48729 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1A1P48729 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1A1P48729 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1A1P48729 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1A1P48729 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms