Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 PTBP1P-201ENST00000554374 1601 ntBASIC19.65■□□□□ 0.74
HOXD12P35452 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HOXD12P35452 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXD12P35452 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.64■□□□□ 0.74
HOXD12P35452 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
HOXD12P35452 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD12P35452 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXD12P35452 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD12P35452 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HOXD12P35452 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD12P35452 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXD12P35452 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD12P35452 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
HOXD12P35452 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXD12P35452 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HOXD12P35452 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
HOXD12P35452 C1QL1P1-201ENST00000568105 661 ntBASIC19.64■□□□□ 0.73
HOXD12P35452 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HOXD12P35452 AC087388.1-201ENST00000571370 1112 ntBASIC19.64■□□□□ 0.73
HOXD12P35452 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.64■□□□□ 0.73
HOXD12P35452 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXD12P35452 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD12P35452 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD12P35452 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD12P35452 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXD12P35452 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXD12P35452 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD12P35452 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD12P35452 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXD12P35452 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD12P35452 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD12P35452 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD12P35452 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXD12P35452 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD12P35452 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD12P35452 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXD12P35452 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD12P35452 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXD12P35452 TSPY14P-201ENST00000303979 915 ntBASIC19.63■□□□□ 0.73
HOXD12P35452 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HOXD12P35452 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD12P35452 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HOXD12P35452 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.63■□□□□ 0.73
HOXD12P35452 ATP5G1P1-201ENST00000448724 379 ntBASIC19.63■□□□□ 0.73
HOXD12P35452 AC104076.2-201ENST00000448912 469 ntBASIC19.63■□□□□ 0.73
HOXD12P35452 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXD12P35452 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXD12P35452 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD12P35452 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXD12P35452 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXD12P35452 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXD12P35452 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD12P35452 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD12P35452 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD12P35452 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXD12P35452 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD12P35452 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD12P35452 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD12P35452 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HOXD12P35452 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD12P35452 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXD12P35452 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.62■□□□□ 0.73
HOXD12P35452 LINC01238-205ENST00000567549 1107 ntBASIC19.62■□□□□ 0.73
HOXD12P35452 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXD12P35452 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD12P35452 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD12P35452 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HOXD12P35452 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD12P35452 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD12P35452 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HOXD12P35452 AL020996.1-203ENST00000536896 2307 ntBASIC19.62■□□□□ 0.73
HOXD12P35452 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD12P35452 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXD12P35452 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD12P35452 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD12P35452 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD12P35452 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD12P35452 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD12P35452 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
HOXD12P35452 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD12P35452 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
HOXD12P35452 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
HOXD12P35452 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.61■□□□□ 0.73
HOXD12P35452 AC128688.1-201ENST00000487626 519 ntBASIC19.61■□□□□ 0.73
HOXD12P35452 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXD12P35452 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.61■□□□□ 0.73
HOXD12P35452 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXD12P35452 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HOXD12P35452 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXD12P35452 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXD12P35452 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXD12P35452 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
HOXD12P35452 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXD12P35452 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HOXD12P35452 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.6■□□□□ 0.73
HOXD12P35452 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXD12P35452 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HOXD12P35452 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HOXD12P35452 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
HOXD12P35452 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms