Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.86■□□□□ 0.77
RPA3P35244 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPA3P35244 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RPA3P35244 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.86■□□□□ 0.77
RPA3P35244 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPA3P35244 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.85■□□□□ 0.77
RPA3P35244 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
RPA3P35244 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPA3P35244 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPA3P35244 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.85■□□□□ 0.77
RPA3P35244 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPA3P35244 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.85■□□□□ 0.77
RPA3P35244 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.85■□□□□ 0.77
RPA3P35244 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RPA3P35244 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RPA3P35244 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
RPA3P35244 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.85■□□□□ 0.77
RPA3P35244 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPA3P35244 OR10C1-204ENST00000622521 1039 ntBASIC19.85■□□□□ 0.77
RPA3P35244 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPA3P35244 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPA3P35244 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPA3P35244 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RPA3P35244 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPA3P35244 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RPA3P35244 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.85■□□□□ 0.77
RPA3P35244 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RPA3P35244 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPA3P35244 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.84■□□□□ 0.77
RPA3P35244 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.84■□□□□ 0.77
RPA3P35244 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RPA3P35244 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.84■□□□□ 0.77
RPA3P35244 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPA3P35244 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPA3P35244 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RPA3P35244 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPA3P35244 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RPA3P35244 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPA3P35244 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPA3P35244 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPA3P35244 AC120498.9-201ENST00000339021 3867 ntBASIC19.84■□□□□ 0.77
RPA3P35244 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RPA3P35244 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPA3P35244 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.84■□□□□ 0.77
RPA3P35244 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.84■□□□□ 0.77
RPA3P35244 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.84■□□□□ 0.77
RPA3P35244 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPA3P35244 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPA3P35244 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPA3P35244 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPA3P35244 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPA3P35244 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
RPA3P35244 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPA3P35244 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RPA3P35244 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.83■□□□□ 0.77
RPA3P35244 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RPA3P35244 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPA3P35244 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RPA3P35244 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.83■□□□□ 0.77
RPA3P35244 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPA3P35244 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPA3P35244 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPA3P35244 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.83■□□□□ 0.77
RPA3P35244 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
RPA3P35244 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPA3P35244 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPA3P35244 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPA3P35244 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPA3P35244 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.83■□□□□ 0.77
RPA3P35244 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPA3P35244 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.83■□□□□ 0.77
RPA3P35244 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.83■□□□□ 0.77
RPA3P35244 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPA3P35244 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.83■□□□□ 0.76
RPA3P35244 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPA3P35244 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RPA3P35244 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RPA3P35244 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
RPA3P35244 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RPA3P35244 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPA3P35244 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.82■□□□□ 0.76
RPA3P35244 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPA3P35244 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPA3P35244 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPA3P35244 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPA3P35244 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RPA3P35244 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.82■□□□□ 0.76
RPA3P35244 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPA3P35244 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.82■□□□□ 0.76
RPA3P35244 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
RPA3P35244 AL050303.2-201ENST00000619798 666 ntBASIC19.82■□□□□ 0.76
RPA3P35244 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.82■□□□□ 0.76
RPA3P35244 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPA3P35244 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPA3P35244 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPA3P35244 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPA3P35244 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RPA3P35244 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPA3P35244 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPA3P35244 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms