Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCKBRP32239 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCKBRP32239 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CCKBRP32239 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCKBRP32239 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCKBRP32239 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCKBRP32239 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCKBRP32239 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
CCKBRP32239 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCKBRP32239 TERF1P1-201ENST00000311003 1181 ntBASIC18.9■□□□□ 0.62
CCKBRP32239 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.9■□□□□ 0.62
CCKBRP32239 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.9■□□□□ 0.62
CCKBRP32239 YBX1P10-201ENST00000444752 975 ntBASIC18.9■□□□□ 0.62
CCKBRP32239 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.9■□□□□ 0.62
CCKBRP32239 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.9■□□□□ 0.62
CCKBRP32239 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.9■□□□□ 0.62
CCKBRP32239 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.9■□□□□ 0.62
CCKBRP32239 DGCR10-201ENST00000609839 495 ntBASIC18.9■□□□□ 0.62
CCKBRP32239 AF106564.1-201ENST00000607058 2553 ntBASIC18.9■□□□□ 0.62
CCKBRP32239 AC005229.4-201ENST00000610085 2198 ntBASIC18.9■□□□□ 0.62
CCKBRP32239 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCKBRP32239 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.9■□□□□ 0.62
CCKBRP32239 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCKBRP32239 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.9■□□□□ 0.62
CCKBRP32239 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCKBRP32239 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.9■□□□□ 0.62
CCKBRP32239 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.9■□□□□ 0.62
CCKBRP32239 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCKBRP32239 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCKBRP32239 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.89■□□□□ 0.62
CCKBRP32239 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.89■□□□□ 0.62
CCKBRP32239 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCKBRP32239 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCKBRP32239 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCKBRP32239 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCKBRP32239 ARMC10P1-201ENST00000313754 855 ntBASIC18.89■□□□□ 0.61
CCKBRP32239 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.89■□□□□ 0.61
CCKBRP32239 AL137013.1-201ENST00000432946 1228 ntBASIC18.89■□□□□ 0.61
CCKBRP32239 SLC25A3P1-201ENST00000443844 931 ntBASIC18.89■□□□□ 0.61
CCKBRP32239 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CCKBRP32239 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.89■□□□□ 0.61
CCKBRP32239 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.89■□□□□ 0.61
CCKBRP32239 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CCKBRP32239 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCKBRP32239 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.89■□□□□ 0.61
CCKBRP32239 KRT16P6-202ENST00000425692 1426 ntBASIC18.89■□□□□ 0.61
CCKBRP32239 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCKBRP32239 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCKBRP32239 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCKBRP32239 TFP1-202ENST00000475455 1573 ntBASIC18.89■□□□□ 0.61
CCKBRP32239 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCKBRP32239 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.88■□□□□ 0.61
CCKBRP32239 MESTP1-201ENST00000404287 994 ntBASIC18.88■□□□□ 0.61
CCKBRP32239 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.88■□□□□ 0.61
CCKBRP32239 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.88■□□□□ 0.61
CCKBRP32239 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.88■□□□□ 0.61
CCKBRP32239 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.88■□□□□ 0.61
CCKBRP32239 AP005242.2-201ENST00000580065 1175 ntBASIC18.88■□□□□ 0.61
CCKBRP32239 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCKBRP32239 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCKBRP32239 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCKBRP32239 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCKBRP32239 AC073508.3-201ENST00000619697 1419 ntBASIC18.88■□□□□ 0.61
CCKBRP32239 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.88■□□□□ 0.61
CCKBRP32239 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCKBRP32239 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCKBRP32239 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCKBRP32239 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.88■□□□□ 0.61
CCKBRP32239 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.88■□□□□ 0.61
CCKBRP32239 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.88■□□□□ 0.61
CCKBRP32239 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCKBRP32239 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCKBRP32239 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.88■□□□□ 0.61
CCKBRP32239 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.88■□□□□ 0.61
CCKBRP32239 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCKBRP32239 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCKBRP32239 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCKBRP32239 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCKBRP32239 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCKBRP32239 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
CCKBRP32239 DPP3P2-201ENST00000416030 1696 ntBASIC18.87■□□□□ 0.61
CCKBRP32239 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCKBRP32239 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.87■□□□□ 0.61
CCKBRP32239 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.87■□□□□ 0.61
CCKBRP32239 KRT18P16-201ENST00000510337 1294 ntBASIC18.87■□□□□ 0.61
CCKBRP32239 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.87■□□□□ 0.61
CCKBRP32239 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCKBRP32239 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.87■□□□□ 0.61
CCKBRP32239 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.87■□□□□ 0.61
CCKBRP32239 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.87■□□□□ 0.61
CCKBRP32239 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.87■□□□□ 0.61
CCKBRP32239 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CCKBRP32239 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.87■□□□□ 0.61
CCKBRP32239 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCKBRP32239 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCKBRP32239 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCKBRP32239 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCKBRP32239 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCKBRP32239 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCKBRP32239 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms