Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC6A4P31645 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A4P31645 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SLC6A4P31645 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC6A4P31645 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.24■□□□□ 0.83
SLC6A4P31645 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC6A4P31645 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC6A4P31645 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.24■□□□□ 0.83
SLC6A4P31645 C1QL1P1-201ENST00000568105 661 ntBASIC20.24■□□□□ 0.83
SLC6A4P31645 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC6A4P31645 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC6A4P31645 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A4P31645 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A4P31645 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SLC6A4P31645 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A4P31645 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC6A4P31645 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A4P31645 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC6A4P31645 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A4P31645 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A4P31645 AL353807.1-201ENST00000427475 662 ntBASIC20.23■□□□□ 0.83
SLC6A4P31645 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC6A4P31645 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A4P31645 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC6A4P31645 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.23■□□□□ 0.83
SLC6A4P31645 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SLC6A4P31645 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A4P31645 AC009237.14-201ENST00000609975 1594 ntBASIC20.23■□□□□ 0.83
SLC6A4P31645 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SLC6A4P31645 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A4P31645 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.23■□□□□ 0.83
SLC6A4P31645 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC6A4P31645 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SLC6A4P31645 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC6A4P31645 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SLC6A4P31645 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A4P31645 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A4P31645 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A4P31645 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A4P31645 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A4P31645 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC6A4P31645 TUBB8P6-201ENST00000436895 1288 ntBASIC20.22■□□□□ 0.83
SLC6A4P31645 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.22■□□□□ 0.83
SLC6A4P31645 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC6A4P31645 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.22■□□□□ 0.83
SLC6A4P31645 AP001412.1-201ENST00000608405 714 ntBASIC20.22■□□□□ 0.83
SLC6A4P31645 AL353708.3-201ENST00000610272 989 ntBASIC20.22■□□□□ 0.83
SLC6A4P31645 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A4P31645 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A4P31645 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A4P31645 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A4P31645 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A4P31645 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SLC6A4P31645 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A4P31645 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC6A4P31645 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A4P31645 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A4P31645 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC6A4P31645 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A4P31645 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SLC6A4P31645 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SLC6A4P31645 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC6A4P31645 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC6A4P31645 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A4P31645 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SLC6A4P31645 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC6A4P31645 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A4P31645 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SLC6A4P31645 FAM197Y1-201ENST00000421178 764 ntBASIC20.21■□□□□ 0.83
SLC6A4P31645 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC6A4P31645 AP002982.1-201ENST00000492365 877 ntBASIC20.21■□□□□ 0.83
SLC6A4P31645 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC6A4P31645 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.21■□□□□ 0.83
SLC6A4P31645 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC6A4P31645 CD177P1-201ENST00000606252 935 ntBASIC20.21■□□□□ 0.83
SLC6A4P31645 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A4P31645 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A4P31645 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SLC6A4P31645 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A4P31645 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
SLC6A4P31645 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A4P31645 NIFKP9-201ENST00000419265 221 ntBASIC20.2■□□□□ 0.82
SLC6A4P31645 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.2■□□□□ 0.82
SLC6A4P31645 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SLC6A4P31645 AC073195.1-201ENST00000607241 877 ntBASIC20.2■□□□□ 0.82
SLC6A4P31645 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SLC6A4P31645 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC6A4P31645 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms