Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 AC116351.2-201ENST00000606540 1585 ntBASIC16.81■□□□□ 0.28
TNFSF4P23510 AP001271.2-201ENST00000624018 1556 ntBASIC16.81■□□□□ 0.28
TNFSF4P23510 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFSF4P23510 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TNFSF4P23510 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFSF4P23510 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.81■□□□□ 0.28
TNFSF4P23510 C1QBPP2-201ENST00000528754 825 ntBASIC16.81■□□□□ 0.28
TNFSF4P23510 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFSF4P23510 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.81■□□□□ 0.28
TNFSF4P23510 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 RN7SL471P-201ENST00000580476 299 ntBASIC16.81■□□□□ 0.28
TNFSF4P23510 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFSF4P23510 MTDHP1-201ENST00000605323 784 ntBASIC16.81■□□□□ 0.28
TNFSF4P23510 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF4P23510 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFSF4P23510 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TNFSF4P23510 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFSF4P23510 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TNFSF4P23510 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFSF4P23510 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TNFSF4P23510 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFSF4P23510 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TNFSF4P23510 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TNFSF4P23510 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TNFSF4P23510 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFSF4P23510 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.8■□□□□ 0.28
TNFSF4P23510 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.8■□□□□ 0.28
TNFSF4P23510 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFSF4P23510 AL157384.1-201ENST00000445995 2473 ntBASIC16.8■□□□□ 0.28
TNFSF4P23510 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
TNFSF4P23510 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFSF4P23510 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.8■□□□□ 0.28
TNFSF4P23510 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFSF4P23510 AC018553.1-201ENST00000616682 1458 ntBASIC16.8■□□□□ 0.28
TNFSF4P23510 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF4P23510 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.79■□□□□ 0.28
TNFSF4P23510 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF4P23510 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF4P23510 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TNFSF4P23510 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF4P23510 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF4P23510 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF4P23510 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF4P23510 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF4P23510 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF4P23510 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.79■□□□□ 0.28
TNFSF4P23510 AC142381.4-202ENST00000563973 229 ntBASIC16.79■□□□□ 0.28
TNFSF4P23510 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.79■□□□□ 0.28
TNFSF4P23510 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.79■□□□□ 0.28
TNFSF4P23510 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.79■□□□□ 0.28
TNFSF4P23510 AC004264.1-201ENST00000608354 794 ntBASIC16.79■□□□□ 0.28
TNFSF4P23510 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF4P23510 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.79■□□□□ 0.28
TNFSF4P23510 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.79■□□□□ 0.28
TNFSF4P23510 AP006587.1-201ENST00000534129 1502 ntBASIC16.79■□□□□ 0.28
TNFSF4P23510 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TNFSF4P23510 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF4P23510 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.79■□□□□ 0.28
TNFSF4P23510 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TNFSF4P23510 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFSF4P23510 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
TNFSF4P23510 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFSF4P23510 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.78■□□□□ 0.28
TNFSF4P23510 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.78■□□□□ 0.28
TNFSF4P23510 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.78■□□□□ 0.28
TNFSF4P23510 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.78■□□□□ 0.28
TNFSF4P23510 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFSF4P23510 PRORSD1P-201ENST00000295112 541 ntBASIC16.78■□□□□ 0.28
TNFSF4P23510 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms