Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL4P13236 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL4P13236 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL4P13236 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL4P13236 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL4P13236 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.61■□□□□ 0.57
CCL4P13236 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL4P13236 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.61■□□□□ 0.57
CCL4P13236 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL4P13236 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCL4P13236 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCL4P13236 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.61■□□□□ 0.57
CCL4P13236 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCL4P13236 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL4P13236 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CCL4P13236 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.61■□□□□ 0.57
CCL4P13236 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL4P13236 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCL4P13236 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.61■□□□□ 0.57
CCL4P13236 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.61■□□□□ 0.57
CCL4P13236 AC006011.2-201ENST00000621313 1158 ntBASIC18.61■□□□□ 0.57
CCL4P13236 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.61■□□□□ 0.57
CCL4P13236 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL4P13236 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL4P13236 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCL4P13236 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.61■□□□□ 0.57
CCL4P13236 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCL4P13236 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL4P13236 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCL4P13236 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.6■□□□□ 0.57
CCL4P13236 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCL4P13236 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCL4P13236 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCL4P13236 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCL4P13236 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.6■□□□□ 0.57
CCL4P13236 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCL4P13236 WWOX-216ENST00000569818 525 ntBASIC18.6■□□□□ 0.57
CCL4P13236 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCL4P13236 FAM87A-204ENST00000613235 858 ntBASIC18.6■□□□□ 0.57
CCL4P13236 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.6■□□□□ 0.57
CCL4P13236 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.6■□□□□ 0.57
CCL4P13236 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCL4P13236 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.6■□□□□ 0.57
CCL4P13236 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.6■□□□□ 0.57
CCL4P13236 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL4P13236 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.6■□□□□ 0.57
CCL4P13236 TMEM179-206ENST00000616017 1645 ntBASIC18.6■□□□□ 0.57
CCL4P13236 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCL4P13236 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.59■□□□□ 0.57
CCL4P13236 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL4P13236 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL4P13236 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL4P13236 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL4P13236 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL4P13236 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.59■□□□□ 0.57
CCL4P13236 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCL4P13236 AC004951.3-201ENST00000418645 1148 ntBASIC18.59■□□□□ 0.57
CCL4P13236 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.59■□□□□ 0.57
CCL4P13236 AC128688.1-201ENST00000487626 519 ntBASIC18.59■□□□□ 0.57
CCL4P13236 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCL4P13236 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.59■□□□□ 0.57
CCL4P13236 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCL4P13236 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCL4P13236 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCL4P13236 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL4P13236 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL4P13236 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCL4P13236 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CCL4P13236 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL4P13236 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.58■□□□□ 0.57
CCL4P13236 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.58■□□□□ 0.57
CCL4P13236 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CCL4P13236 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCL4P13236 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCL4P13236 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCL4P13236 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCL4P13236 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCL4P13236 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCL4P13236 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCL4P13236 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCL4P13236 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCL4P13236 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCL4P13236 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCL4P13236 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCL4P13236 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms