Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.94■□□□□ 0.78
COL4A2P08572 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.94■□□□□ 0.78
COL4A2P08572 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A2P08572 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A2P08572 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.94■□□□□ 0.78
COL4A2P08572 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.94■□□□□ 0.78
COL4A2P08572 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.94■□□□□ 0.78
COL4A2P08572 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.94■□□□□ 0.78
COL4A2P08572 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
COL4A2P08572 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
COL4A2P08572 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COL4A2P08572 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A2P08572 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A2P08572 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
COL4A2P08572 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL4A2P08572 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A2P08572 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.93■□□□□ 0.78
COL4A2P08572 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.93■□□□□ 0.78
COL4A2P08572 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.93■□□□□ 0.78
COL4A2P08572 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.93■□□□□ 0.78
COL4A2P08572 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.93■□□□□ 0.78
COL4A2P08572 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.93■□□□□ 0.78
COL4A2P08572 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A2P08572 AC009947.2-201ENST00000444014 672 ntBASIC19.93■□□□□ 0.78
COL4A2P08572 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.93■□□□□ 0.78
COL4A2P08572 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.93■□□□□ 0.78
COL4A2P08572 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.93■□□□□ 0.78
COL4A2P08572 AC091076.1-201ENST00000610741 619 ntBASIC19.93■□□□□ 0.78
COL4A2P08572 AL023803.3-201ENST00000615559 522 ntBASIC19.93■□□□□ 0.78
COL4A2P08572 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A2P08572 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A2P08572 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A2P08572 AC092338.2-201ENST00000568827 1415 ntBASIC19.93■□□□□ 0.78
COL4A2P08572 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A2P08572 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.93■□□□□ 0.78
COL4A2P08572 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A2P08572 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A2P08572 LINC00565-201ENST00000562710 2331 ntBASIC19.93■□□□□ 0.78
COL4A2P08572 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A2P08572 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COL4A2P08572 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL4A2P08572 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A2P08572 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A2P08572 AC005332.1-201ENST00000577698 1310 ntBASIC19.93■□□□□ 0.78
COL4A2P08572 RNF152P1-201ENST00000397754 604 ntBASIC19.93■□□□□ 0.78
COL4A2P08572 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A2P08572 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL4A2P08572 SLC25A1P2-201ENST00000430693 912 ntBASIC19.93■□□□□ 0.78
COL4A2P08572 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.93■□□□□ 0.78
COL4A2P08572 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.93■□□□□ 0.78
COL4A2P08572 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
COL4A2P08572 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.93■□□□□ 0.78
COL4A2P08572 AC116562.4-202ENST00000641738 218 ntBASIC19.93■□□□□ 0.78
COL4A2P08572 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.93■□□□□ 0.78
COL4A2P08572 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A2P08572 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.93■□□□□ 0.78
COL4A2P08572 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.93■□□□□ 0.78
COL4A2P08572 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A2P08572 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A2P08572 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.92■□□□□ 0.78
COL4A2P08572 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
COL4A2P08572 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.92■□□□□ 0.78
COL4A2P08572 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A2P08572 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
COL4A2P08572 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A2P08572 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A2P08572 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
COL4A2P08572 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.92■□□□□ 0.78
COL4A2P08572 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A2P08572 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
COL4A2P08572 COX11P1-201ENST00000489116 835 ntBASIC19.92■□□□□ 0.78
COL4A2P08572 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A2P08572 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A2P08572 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
COL4A2P08572 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.92■□□□□ 0.78
COL4A2P08572 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A2P08572 AL121894.2-201ENST00000602977 491 ntBASIC19.92■□□□□ 0.78
COL4A2P08572 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A2P08572 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
COL4A2P08572 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A2P08572 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A2P08572 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.92■□□□□ 0.78
COL4A2P08572 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A2P08572 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A2P08572 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.91■□□□□ 0.78
COL4A2P08572 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.91■□□□□ 0.78
COL4A2P08572 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.91■□□□□ 0.78
COL4A2P08572 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.91■□□□□ 0.78
COL4A2P08572 FAM86EP-206ENST00000510506 987 ntBASIC19.91■□□□□ 0.78
COL4A2P08572 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.91■□□□□ 0.78
COL4A2P08572 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.91■□□□□ 0.78
COL4A2P08572 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.91■□□□□ 0.78
COL4A2P08572 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COL4A2P08572 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.91■□□□□ 0.78
COL4A2P08572 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.91■□□□□ 0.78
COL4A2P08572 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.91■□□□□ 0.78
COL4A2P08572 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.91■□□□□ 0.78
COL4A2P08572 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A2P08572 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A2P08572 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms