Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PDGFAP04085 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFAP04085 UNC93B2-201ENST00000285383 730 ntBASIC18.38■□□□□ 0.53
PDGFAP04085 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFAP04085 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.38■□□□□ 0.53
PDGFAP04085 AP002982.1-201ENST00000492365 877 ntBASIC18.38■□□□□ 0.53
PDGFAP04085 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFAP04085 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.38■□□□□ 0.53
PDGFAP04085 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.38■□□□□ 0.53
PDGFAP04085 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.38■□□□□ 0.53
PDGFAP04085 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.38■□□□□ 0.53
PDGFAP04085 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFAP04085 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.38■□□□□ 0.53
PDGFAP04085 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFAP04085 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFAP04085 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PDGFAP04085 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFAP04085 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PDGFAP04085 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFAP04085 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFAP04085 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFAP04085 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFAP04085 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
PDGFAP04085 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFAP04085 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.37■□□□□ 0.53
PDGFAP04085 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFAP04085 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFAP04085 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFAP04085 AC113347.1-201ENST00000413321 391 ntBASIC18.37■□□□□ 0.53
PDGFAP04085 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.37■□□□□ 0.53
PDGFAP04085 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.37■□□□□ 0.53
PDGFAP04085 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PDGFAP04085 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PDGFAP04085 AL031963.3-201ENST00000606441 850 ntBASIC18.37■□□□□ 0.53
PDGFAP04085 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
PDGFAP04085 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.37■□□□□ 0.53
PDGFAP04085 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.37■□□□□ 0.53
PDGFAP04085 LINC01568-207ENST00000641790 1380 ntBASIC18.37■□□□□ 0.53
PDGFAP04085 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFAP04085 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFAP04085 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFAP04085 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PDGFAP04085 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.37■□□□□ 0.53
PDGFAP04085 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFAP04085 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFAP04085 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.37■□□□□ 0.53
PDGFAP04085 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFAP04085 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.37■□□□□ 0.53
PDGFAP04085 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PDGFAP04085 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFAP04085 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFAP04085 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFAP04085 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFAP04085 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.36■□□□□ 0.53
PDGFAP04085 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PDGFAP04085 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PDGFAP04085 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFAP04085 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
PDGFAP04085 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PDGFAP04085 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.36■□□□□ 0.53
PDGFAP04085 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFAP04085 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFAP04085 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
PDGFAP04085 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.36■□□□□ 0.53
PDGFAP04085 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFAP04085 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.36■□□□□ 0.53
PDGFAP04085 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.36■□□□□ 0.53
PDGFAP04085 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PDGFAP04085 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.36■□□□□ 0.53
PDGFAP04085 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PDGFAP04085 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.36■□□□□ 0.53
PDGFAP04085 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFAP04085 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PDGFAP04085 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
PDGFAP04085 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFAP04085 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.36■□□□□ 0.53
PDGFAP04085 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
PDGFAP04085 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFAP04085 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFAP04085 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.35■□□□□ 0.53
PDGFAP04085 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PDGFAP04085 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.35■□□□□ 0.53
PDGFAP04085 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFAP04085 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFAP04085 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFAP04085 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFAP04085 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFAP04085 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFAP04085 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.35■□□□□ 0.53
PDGFAP04085 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.35■□□□□ 0.53
PDGFAP04085 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PDGFAP04085 AC004264.1-201ENST00000608354 794 ntBASIC18.35■□□□□ 0.53
PDGFAP04085 AC010947.1-201ENST00000623454 693 ntBASIC18.35■□□□□ 0.53
PDGFAP04085 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.35■□□□□ 0.53
PDGFAP04085 MIR2861-201ENST00000636310 90 ntBASIC18.35■□□□□ 0.53
PDGFAP04085 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFAP04085 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.35■□□□□ 0.53
PDGFAP04085 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFAP04085 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PDGFAP04085 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms