Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC4O75487 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
GPC4O75487 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC4O75487 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC4O75487 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
GPC4O75487 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
GPC4O75487 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
GPC4O75487 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.67■□□□□ 0.74
GPC4O75487 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.67■□□□□ 0.74
GPC4O75487 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
GPC4O75487 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
GPC4O75487 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC4O75487 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
GPC4O75487 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC4O75487 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC4O75487 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.67■□□□□ 0.74
GPC4O75487 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.67■□□□□ 0.74
GPC4O75487 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.67■□□□□ 0.74
GPC4O75487 AL031963.3-201ENST00000606441 850 ntBASIC19.67■□□□□ 0.74
GPC4O75487 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
GPC4O75487 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GPC4O75487 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC4O75487 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC4O75487 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC4O75487 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC4O75487 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.66■□□□□ 0.74
GPC4O75487 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
GPC4O75487 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.66■□□□□ 0.74
GPC4O75487 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC4O75487 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 KRT8P20-201ENST00000423953 1409 ntBASIC19.66■□□□□ 0.74
GPC4O75487 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC4O75487 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
GPC4O75487 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
GPC4O75487 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC4O75487 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC4O75487 BX119927.1-201ENST00000636596 1552 ntBASIC19.66■□□□□ 0.74
GPC4O75487 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC4O75487 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.65■□□□□ 0.74
GPC4O75487 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC4O75487 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC4O75487 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.65■□□□□ 0.74
GPC4O75487 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.65■□□□□ 0.74
GPC4O75487 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
GPC4O75487 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC4O75487 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.65■□□□□ 0.74
GPC4O75487 AC090340.1-201ENST00000620778 4980 ntBASIC19.65■□□□□ 0.74
GPC4O75487 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.65■□□□□ 0.74
GPC4O75487 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.65■□□□□ 0.74
GPC4O75487 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GPC4O75487 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
GPC4O75487 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC4O75487 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC4O75487 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC4O75487 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.65■□□□□ 0.74
GPC4O75487 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GPC4O75487 HLA-B-256ENST00000639848 1089 ntBASIC19.65■□□□□ 0.74
GPC4O75487 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
GPC4O75487 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC4O75487 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC4O75487 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC4O75487 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
GPC4O75487 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC4O75487 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.65■□□□□ 0.74
GPC4O75487 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GPC4O75487 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
GPC4O75487 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GPC4O75487 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.64■□□□□ 0.74
GPC4O75487 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
GPC4O75487 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
GPC4O75487 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC4O75487 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
GPC4O75487 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC4O75487 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
GPC4O75487 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
GPC4O75487 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.64■□□□□ 0.73
GPC4O75487 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.64■□□□□ 0.73
GPC4O75487 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.64■□□□□ 0.73
GPC4O75487 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GPC4O75487 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC4O75487 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC4O75487 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
GPC4O75487 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC4O75487 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms