Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC8.83□□□□□ -1
USH2AO75445 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC8.83□□□□□ -1
USH2AO75445 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
USH2AO75445 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC8.83□□□□□ -1
USH2AO75445 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
USH2AO75445 BET1L-206ENST00000486280 665 ntTSL 3 BASIC8.83□□□□□ -1
USH2AO75445 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC8.83□□□□□ -1
USH2AO75445 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC8.83□□□□□ -1
USH2AO75445 AC011498.5-201ENST00000592027 486 ntBASIC8.83□□□□□ -1
USH2AO75445 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC8.83□□□□□ -1
USH2AO75445 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC8.83□□□□□ -1
USH2AO75445 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC8.83□□□□□ -1
USH2AO75445 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
USH2AO75445 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC8.83□□□□□ -1
USH2AO75445 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC8.83□□□□□ -1
USH2AO75445 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC8.83□□□□□ -1
USH2AO75445 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC8.82□□□□□ -1
USH2AO75445 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC8.82□□□□□ -1
USH2AO75445 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
USH2AO75445 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC8.82□□□□□ -1
USH2AO75445 Z85996.1-201ENST00000494644 937 ntBASIC8.82□□□□□ -1
USH2AO75445 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC8.82□□□□□ -1
USH2AO75445 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
USH2AO75445 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC8.82□□□□□ -1
USH2AO75445 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC8.82□□□□□ -1
USH2AO75445 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC8.82□□□□□ -1
USH2AO75445 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC8.82□□□□□ -1
USH2AO75445 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 CALY-203ENST00000368558 825 ntTSL 5 BASIC8.82□□□□□ -1
USH2AO75445 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC8.82□□□□□ -1
USH2AO75445 AC092597.1-201ENST00000487352 616 ntBASIC8.82□□□□□ -1
USH2AO75445 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC8.82□□□□□ -1
USH2AO75445 AC092329.2-201ENST00000598402 547 ntBASIC8.82□□□□□ -1
USH2AO75445 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
USH2AO75445 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC8.82□□□□□ -1
USH2AO75445 IGHV3-22-201ENST00000520721 359 ntBASIC8.82□□□□□ -1
USH2AO75445 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC8.82□□□□□ -1
USH2AO75445 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC8.82□□□□□ -1
USH2AO75445 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC8.82□□□□□ -1
USH2AO75445 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
USH2AO75445 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 PPIE-208ENST00000470213 927 ntTSL 3 BASIC8.82□□□□□ -1
USH2AO75445 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC8.82□□□□□ -1
USH2AO75445 PENK-208ENST00000523051 772 ntTSL 5 BASIC8.82□□□□□ -1
USH2AO75445 MIR4674-201ENST00000582457 87 ntBASIC8.82□□□□□ -1
USH2AO75445 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC8.82□□□□□ -1
USH2AO75445 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
USH2AO75445 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC8.81□□□□□ -1
USH2AO75445 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
USH2AO75445 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC8.81□□□□□ -1
USH2AO75445 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC8.81□□□□□ -1
USH2AO75445 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC8.81□□□□□ -1
USH2AO75445 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
USH2AO75445 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC8.81□□□□□ -1
USH2AO75445 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC8.81□□□□□ -1
USH2AO75445 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
USH2AO75445 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC8.81□□□□□ -1
USH2AO75445 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
USH2AO75445 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC8.81□□□□□ -1
USH2AO75445 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
USH2AO75445 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
USH2AO75445 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
USH2AO75445 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
USH2AO75445 KRT16P4-201ENST00000453883 522 ntBASIC8.81□□□□□ -1
USH2AO75445 FGF14-AS2-201ENST00000606448 1074 ntBASIC8.81□□□□□ -1
USH2AO75445 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC8.81□□□□□ -1
USH2AO75445 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
USH2AO75445 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
USH2AO75445 AP000523.1-201ENST00000398242 1049 ntBASIC8.81□□□□□ -1
USH2AO75445 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
USH2AO75445 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
USH2AO75445 AL662844.1-201ENST00000546340 181 ntBASIC8.81□□□□□ -1
USH2AO75445 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
USH2AO75445 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms