Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 AL050303.2-201ENST00000619798 666 ntBASIC18.65■□□□□ 0.58
SCN2BO60939 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.65■□□□□ 0.58
SCN2BO60939 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.65■□□□□ 0.58
SCN2BO60939 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.65■□□□□ 0.58
SCN2BO60939 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
SCN2BO60939 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.65■□□□□ 0.58
SCN2BO60939 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SCN2BO60939 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.65■□□□□ 0.58
SCN2BO60939 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SCN2BO60939 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.65■□□□□ 0.58
SCN2BO60939 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SCN2BO60939 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.58
SCN2BO60939 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
SCN2BO60939 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN2BO60939 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN2BO60939 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN2BO60939 GPX1P1-201ENST00000388829 606 ntBASIC18.64■□□□□ 0.57
SCN2BO60939 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN2BO60939 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.64■□□□□ 0.57
SCN2BO60939 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN2BO60939 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.64■□□□□ 0.57
SCN2BO60939 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN2BO60939 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN2BO60939 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN2BO60939 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.64■□□□□ 0.57
SCN2BO60939 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.64■□□□□ 0.57
SCN2BO60939 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN2BO60939 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SCN2BO60939 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN2BO60939 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SCN2BO60939 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.64■□□□□ 0.57
SCN2BO60939 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN2BO60939 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.64■□□□□ 0.57
SCN2BO60939 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN2BO60939 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN2BO60939 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SCN2BO60939 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN2BO60939 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.63■□□□□ 0.57
SCN2BO60939 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN2BO60939 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN2BO60939 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SCN2BO60939 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SCN2BO60939 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.63■□□□□ 0.57
SCN2BO60939 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN2BO60939 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCN2BO60939 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCN2BO60939 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
SCN2BO60939 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN2BO60939 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.63■□□□□ 0.57
SCN2BO60939 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.63■□□□□ 0.57
SCN2BO60939 AC080038.1-201ENST00000611274 1154 ntBASIC18.63■□□□□ 0.57
SCN2BO60939 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.63■□□□□ 0.57
SCN2BO60939 AC073111.5-205ENST00000641717 521 ntBASIC18.63■□□□□ 0.57
SCN2BO60939 AL032819.2-201ENST00000624543 2162 ntBASIC18.63■□□□□ 0.57
SCN2BO60939 AL020996.1-203ENST00000536896 2307 ntBASIC18.63■□□□□ 0.57
SCN2BO60939 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN2BO60939 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.63■□□□□ 0.57
SCN2BO60939 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
SCN2BO60939 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCN2BO60939 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN2BO60939 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SCN2BO60939 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
SCN2BO60939 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCN2BO60939 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.63■□□□□ 0.57
SCN2BO60939 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.62■□□□□ 0.57
SCN2BO60939 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SCN2BO60939 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN2BO60939 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.62■□□□□ 0.57
SCN2BO60939 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN2BO60939 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCN2BO60939 CDCA4P2-201ENST00000441182 718 ntBASIC18.62■□□□□ 0.57
SCN2BO60939 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.62■□□□□ 0.57
SCN2BO60939 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.62■□□□□ 0.57
SCN2BO60939 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCN2BO60939 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.62■□□□□ 0.57
SCN2BO60939 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN2BO60939 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN2BO60939 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.62■□□□□ 0.57
SCN2BO60939 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCN2BO60939 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SCN2BO60939 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.62■□□□□ 0.57
SCN2BO60939 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCN2BO60939 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN2BO60939 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN2BO60939 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN2BO60939 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SCN2BO60939 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SCN2BO60939 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms