Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.75■□□□□ 0.43
ZIC3O60481 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZIC3O60481 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
ZIC3O60481 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
ZIC3O60481 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.75■□□□□ 0.43
ZIC3O60481 HTR7P1-201ENST00000538670 1336 ntBASIC17.75■□□□□ 0.43
ZIC3O60481 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
ZIC3O60481 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ZIC3O60481 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZIC3O60481 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.75■□□□□ 0.43
ZIC3O60481 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.75■□□□□ 0.43
ZIC3O60481 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZIC3O60481 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZIC3O60481 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZIC3O60481 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.75■□□□□ 0.43
ZIC3O60481 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZIC3O60481 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.75■□□□□ 0.43
ZIC3O60481 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ZIC3O60481 AC233702.5-201ENST00000584107 538 ntBASIC17.75■□□□□ 0.43
ZIC3O60481 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.75■□□□□ 0.43
ZIC3O60481 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZIC3O60481 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZIC3O60481 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ZIC3O60481 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ZIC3O60481 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.74■□□□□ 0.43
ZIC3O60481 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ZIC3O60481 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.74■□□□□ 0.43
ZIC3O60481 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 AL135905.2-201ENST00000584934 1404 ntBASIC17.74■□□□□ 0.43
ZIC3O60481 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.74■□□□□ 0.43
ZIC3O60481 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.74■□□□□ 0.43
ZIC3O60481 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ZIC3O60481 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ZIC3O60481 AC012618.2-201ENST00000428058 849 ntBASIC17.74■□□□□ 0.43
ZIC3O60481 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 TUBB8P6-201ENST00000436895 1288 ntBASIC17.74■□□□□ 0.43
ZIC3O60481 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.74■□□□□ 0.43
ZIC3O60481 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.74■□□□□ 0.43
ZIC3O60481 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ZIC3O60481 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.74■□□□□ 0.43
ZIC3O60481 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZIC3O60481 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZIC3O60481 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.73■□□□□ 0.43
ZIC3O60481 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.73■□□□□ 0.43
ZIC3O60481 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.73■□□□□ 0.43
ZIC3O60481 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZIC3O60481 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZIC3O60481 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZIC3O60481 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZIC3O60481 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZIC3O60481 MIR718-201ENST00000390190 70 ntBASIC17.73■□□□□ 0.43
ZIC3O60481 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.73■□□□□ 0.43
ZIC3O60481 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
ZIC3O60481 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.73■□□□□ 0.43
ZIC3O60481 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.73■□□□□ 0.43
ZIC3O60481 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.73■□□□□ 0.43
ZIC3O60481 AF186192.3-201ENST00000583427 947 ntBASIC17.73■□□□□ 0.43
ZIC3O60481 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.73■□□□□ 0.43
ZIC3O60481 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZIC3O60481 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.73■□□□□ 0.43
ZIC3O60481 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZIC3O60481 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZIC3O60481 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZIC3O60481 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.73■□□□□ 0.43
ZIC3O60481 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZIC3O60481 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZIC3O60481 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ZIC3O60481 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZIC3O60481 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.73■□□□□ 0.43
ZIC3O60481 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
ZIC3O60481 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ZIC3O60481 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.72■□□□□ 0.43
ZIC3O60481 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZIC3O60481 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.72■□□□□ 0.43
ZIC3O60481 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZIC3O60481 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
ZIC3O60481 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZIC3O60481 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.72■□□□□ 0.43
ZIC3O60481 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.72■□□□□ 0.43
ZIC3O60481 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.72■□□□□ 0.43
ZIC3O60481 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.72■□□□□ 0.43
ZIC3O60481 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.72■□□□□ 0.43
ZIC3O60481 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZIC3O60481 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZIC3O60481 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms