Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SMAD6O43541 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SMAD6O43541 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.93■□□□□ 0.78
SMAD6O43541 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMAD6O43541 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.93■□□□□ 0.78
SMAD6O43541 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMAD6O43541 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMAD6O43541 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMAD6O43541 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMAD6O43541 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.93■□□□□ 0.78
SMAD6O43541 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMAD6O43541 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMAD6O43541 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SMAD6O43541 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.92■□□□□ 0.78
SMAD6O43541 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD6O43541 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD6O43541 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SMAD6O43541 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SMAD6O43541 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD6O43541 TMEM179-206ENST00000616017 1645 ntBASIC19.92■□□□□ 0.78
SMAD6O43541 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.92■□□□□ 0.78
SMAD6O43541 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD6O43541 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.92■□□□□ 0.78
SMAD6O43541 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.92■□□□□ 0.78
SMAD6O43541 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.92■□□□□ 0.78
SMAD6O43541 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.92■□□□□ 0.78
SMAD6O43541 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD6O43541 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.92■□□□□ 0.78
SMAD6O43541 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.92■□□□□ 0.78
SMAD6O43541 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD6O43541 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD6O43541 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD6O43541 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD6O43541 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.92■□□□□ 0.78
SMAD6O43541 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD6O43541 AC009237.14-201ENST00000609975 1594 ntBASIC19.91■□□□□ 0.78
SMAD6O43541 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD6O43541 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.91■□□□□ 0.78
SMAD6O43541 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.91■□□□□ 0.78
SMAD6O43541 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.91■□□□□ 0.78
SMAD6O43541 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.91■□□□□ 0.78
SMAD6O43541 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
SMAD6O43541 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.91■□□□□ 0.78
SMAD6O43541 AP001412.1-201ENST00000608405 714 ntBASIC19.91■□□□□ 0.78
SMAD6O43541 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.91■□□□□ 0.78
SMAD6O43541 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD6O43541 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SMAD6O43541 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SMAD6O43541 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.91■□□□□ 0.78
SMAD6O43541 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SMAD6O43541 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD6O43541 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD6O43541 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD6O43541 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD6O43541 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD6O43541 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD6O43541 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD6O43541 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD6O43541 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD6O43541 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.9■□□□□ 0.78
SMAD6O43541 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD6O43541 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SMAD6O43541 FAM197Y1-201ENST00000421178 764 ntBASIC19.9■□□□□ 0.78
SMAD6O43541 TUBB8P6-201ENST00000436895 1288 ntBASIC19.9■□□□□ 0.78
SMAD6O43541 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.9■□□□□ 0.78
SMAD6O43541 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.9■□□□□ 0.78
SMAD6O43541 AP002982.1-201ENST00000492365 877 ntBASIC19.9■□□□□ 0.78
SMAD6O43541 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.9■□□□□ 0.78
SMAD6O43541 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.9■□□□□ 0.78
SMAD6O43541 C1QL1P1-201ENST00000568105 661 ntBASIC19.9■□□□□ 0.78
SMAD6O43541 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.9■□□□□ 0.78
SMAD6O43541 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.9■□□□□ 0.78
SMAD6O43541 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD6O43541 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SMAD6O43541 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD6O43541 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.9■□□□□ 0.78
SMAD6O43541 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD6O43541 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD6O43541 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD6O43541 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD6O43541 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD6O43541 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD6O43541 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD6O43541 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD6O43541 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD6O43541 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.89■□□□□ 0.77
SMAD6O43541 AL353807.1-201ENST00000427475 662 ntBASIC19.89■□□□□ 0.77
SMAD6O43541 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.89■□□□□ 0.77
SMAD6O43541 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.89■□□□□ 0.77
SMAD6O43541 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SMAD6O43541 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SMAD6O43541 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
SMAD6O43541 CD177P1-201ENST00000606252 935 ntBASIC19.89■□□□□ 0.77
SMAD6O43541 AL353708.3-201ENST00000610272 989 ntBASIC19.89■□□□□ 0.77
SMAD6O43541 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.89■□□□□ 0.77
SMAD6O43541 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SMAD6O43541 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SMAD6O43541 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.88■□□□□ 0.77
SMAD6O43541 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD6O43541 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms