Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHF1O43189 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF1O43189 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.97■□□□□ 0.31
PHF1O43189 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHF1O43189 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHF1O43189 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PHF1O43189 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.97■□□□□ 0.31
PHF1O43189 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF1O43189 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF1O43189 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF1O43189 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PHF1O43189 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF1O43189 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF1O43189 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.97■□□□□ 0.31
PHF1O43189 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PHF1O43189 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHF1O43189 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHF1O43189 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.96■□□□□ 0.31
PHF1O43189 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.96■□□□□ 0.31
PHF1O43189 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHF1O43189 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.96■□□□□ 0.31
PHF1O43189 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHF1O43189 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.96■□□□□ 0.31
PHF1O43189 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHF1O43189 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHF1O43189 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHF1O43189 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHF1O43189 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHF1O43189 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.96■□□□□ 0.31
PHF1O43189 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.96■□□□□ 0.31
PHF1O43189 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHF1O43189 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHF1O43189 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.96■□□□□ 0.31
PHF1O43189 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHF1O43189 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.96■□□□□ 0.31
PHF1O43189 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHF1O43189 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
PHF1O43189 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHF1O43189 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PHF1O43189 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PHF1O43189 AC011484.1-201ENST00000377652 1995 ntBASIC16.96■□□□□ 0.31
PHF1O43189 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHF1O43189 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PHF1O43189 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PHF1O43189 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.96■□□□□ 0.3
PHF1O43189 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHF1O43189 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF1O43189 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.95■□□□□ 0.3
PHF1O43189 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF1O43189 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PHF1O43189 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PHF1O43189 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.95■□□□□ 0.3
PHF1O43189 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF1O43189 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
PHF1O43189 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PHF1O43189 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.95■□□□□ 0.3
PHF1O43189 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PHF1O43189 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHF1O43189 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.95■□□□□ 0.3
PHF1O43189 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.95■□□□□ 0.3
PHF1O43189 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.95■□□□□ 0.3
PHF1O43189 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF1O43189 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.95■□□□□ 0.3
PHF1O43189 AC008403.3-201ENST00000598924 454 ntBASIC16.95■□□□□ 0.3
PHF1O43189 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHF1O43189 AC105020.6-201ENST00000621523 1217 ntBASIC16.95■□□□□ 0.3
PHF1O43189 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF1O43189 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF1O43189 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PHF1O43189 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF1O43189 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF1O43189 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF1O43189 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PHF1O43189 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF1O43189 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.94■□□□□ 0.3
PHF1O43189 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHF1O43189 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF1O43189 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF1O43189 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PHF1O43189 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF1O43189 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF1O43189 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.94■□□□□ 0.3
PHF1O43189 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF1O43189 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.94■□□□□ 0.3
PHF1O43189 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.94■□□□□ 0.3
PHF1O43189 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.94■□□□□ 0.3
PHF1O43189 BX088651.1-201ENST00000540551 451 ntBASIC16.94■□□□□ 0.3
PHF1O43189 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.94■□□□□ 0.3
PHF1O43189 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.94■□□□□ 0.3
PHF1O43189 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF1O43189 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.94■□□□□ 0.3
PHF1O43189 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PHF1O43189 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PHF1O43189 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHF1O43189 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PHF1O43189 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF1O43189 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
PHF1O43189 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.94■□□□□ 0.3
PHF1O43189 AC087633.2-202ENST00000565166 1439 ntBASIC16.94■□□□□ 0.3
PHF1O43189 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms