Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CHD1O14646 AP002383.4-201ENST00000442518 975 ntBASIC32.1■■■□□ 2.73
CHD1O14646 AC106795.1-205ENST00000512851 1056 ntBASIC32.1■■■□□ 2.73
CHD1O14646 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
CHD1O14646 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CHD1O14646 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
CHD1O14646 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CHD1O14646 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
CHD1O14646 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CHD1O14646 FGF14-AS2-201ENST00000606448 1074 ntBASIC32.09■■■□□ 2.73
CHD1O14646 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CHD1O14646 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC32.09■■■□□ 2.73
CHD1O14646 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CHD1O14646 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CHD1O14646 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
CHD1O14646 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC32.08■■■□□ 2.73
CHD1O14646 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC32.08■■■□□ 2.73
CHD1O14646 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC32.08■■■□□ 2.73
CHD1O14646 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC32.08■■■□□ 2.73
CHD1O14646 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC32.08■■■□□ 2.73
CHD1O14646 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC32.08■■■□□ 2.73
CHD1O14646 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC32.07■■■□□ 2.73
CHD1O14646 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC32.07■■■□□ 2.73
CHD1O14646 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.73
CHD1O14646 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC32.07■■■□□ 2.73
CHD1O14646 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CHD1O14646 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
CHD1O14646 AL160237.2-201ENST00000556165 472 ntBASIC32.07■■■□□ 2.72
CHD1O14646 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC32.07■■■□□ 2.72
CHD1O14646 WDR6-223ENST00000627177 207 ntTSL 2 BASIC32.07■■■□□ 2.72
CHD1O14646 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC32.07■■■□□ 2.72
CHD1O14646 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
CHD1O14646 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CHD1O14646 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC32.07■■■□□ 2.72
CHD1O14646 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CHD1O14646 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
CHD1O14646 PARN-205ENST00000539279 1557 ntTSL 2 BASIC32.07■■■□□ 2.72
CHD1O14646 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CHD1O14646 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
CHD1O14646 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC32.06■■■□□ 2.72
CHD1O14646 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC32.06■■■□□ 2.72
CHD1O14646 BMF-207ENST00000559701 630 ntTSL 3 BASIC32.06■■■□□ 2.72
CHD1O14646 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CHD1O14646 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
CHD1O14646 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC32.06■■■□□ 2.72
CHD1O14646 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
CHD1O14646 GOLGA2P6-201ENST00000340929 2049 ntBASIC32.06■■■□□ 2.72
CHD1O14646 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC32.06■■■□□ 2.72
CHD1O14646 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CHD1O14646 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC32.06■■■□□ 2.72
CHD1O14646 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CHD1O14646 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CHD1O14646 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CHD1O14646 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC32.06■■■□□ 2.72
CHD1O14646 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC32.06■■■□□ 2.72
CHD1O14646 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC32.06■■■□□ 2.72
CHD1O14646 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
CHD1O14646 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC32.06■■■□□ 2.72
CHD1O14646 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
CHD1O14646 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
CHD1O14646 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
CHD1O14646 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CHD1O14646 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC32.05■■■□□ 2.72
CHD1O14646 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC32.05■■■□□ 2.72
CHD1O14646 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CHD1O14646 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CHD1O14646 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
CHD1O14646 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CHD1O14646 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC32.04■■■□□ 2.72
CHD1O14646 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC32.04■■■□□ 2.72
CHD1O14646 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CHD1O14646 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC32.04■■■□□ 2.72
CHD1O14646 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC32.04■■■□□ 2.72
CHD1O14646 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC32.04■■■□□ 2.72
CHD1O14646 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CHD1O14646 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
CHD1O14646 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC32.03■■■□□ 2.72
CHD1O14646 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CHD1O14646 AP002469.2-201ENST00000531724 424 ntBASIC32.03■■■□□ 2.72
CHD1O14646 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC32.03■■■□□ 2.72
CHD1O14646 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CHD1O14646 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
CHD1O14646 AC016734.2-201ENST00000624325 1377 ntBASIC32.03■■■□□ 2.72
CHD1O14646 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
CHD1O14646 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
CHD1O14646 MRPL3P1-201ENST00000400109 1033 ntBASIC32.03■■■□□ 2.72
CHD1O14646 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC32.03■■■□□ 2.72
CHD1O14646 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC32.03■■■□□ 2.72
CHD1O14646 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CHD1O14646 C1orf229-201ENST00000623686 2258 ntBASIC32.02■■■□□ 2.72
CHD1O14646 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CHD1O14646 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CHD1O14646 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CHD1O14646 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
CHD1O14646 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CHD1O14646 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
CHD1O14646 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CHD1O14646 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CHD1O14646 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CHD1O14646 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC32.02■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms