Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF4LA6NMK7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF4LA6NMK7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF4LA6NMK7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF4LA6NMK7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF4LA6NMK7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.14■□□□□ 0.49
CPSF4LA6NMK7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF4LA6NMK7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF4LA6NMK7 AC098818.2-201ENST00000564925 2320 ntBASIC18.14■□□□□ 0.49
CPSF4LA6NMK7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 RNF165-205ENST00000588679 2904 ntBASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 LSM12P1-201ENST00000411836 588 ntBASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 AC023632.3-201ENST00000521633 145 ntBASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF4LA6NMK7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CPSF4LA6NMK7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 AC080038.1-201ENST00000611274 1154 ntBASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 IKBKGP1-201ENST00000612193 1073 ntBASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 AP000974.1-201ENST00000623909 2387 ntBASIC18.11■□□□□ 0.49
CPSF4LA6NMK7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF4LA6NMK7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CPSF4LA6NMK7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF4LA6NMK7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.1■□□□□ 0.49
CPSF4LA6NMK7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.1■□□□□ 0.49
CPSF4LA6NMK7 HCG11-201ENST00000411553 5696 ntBASIC18.1■□□□□ 0.49
CPSF4LA6NMK7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.1■□□□□ 0.49
CPSF4LA6NMK7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF4LA6NMK7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CPSF4LA6NMK7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF4LA6NMK7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.1■□□□□ 0.49
CPSF4LA6NMK7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms