Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
LINC01548A6NM66 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.55■□□□□ 0.08
LINC01548A6NM66 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC01548A6NM66 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC01548A6NM66 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01548A6NM66 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01548A6NM66 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01548A6NM66 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01548A6NM66 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01548A6NM66 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.55■□□□□ 0.08
LINC01548A6NM66 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.54■□□□□ 0.08
LINC01548A6NM66 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 AP006587.1-201ENST00000534129 1502 ntBASIC15.54■□□□□ 0.08
LINC01548A6NM66 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 UBE2SP1-201ENST00000450587 669 ntBASIC15.54■□□□□ 0.08
LINC01548A6NM66 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 AFG3L1P-217ENST00000557444 2447 ntBASIC15.54■□□□□ 0.08
LINC01548A6NM66 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
LINC01548A6NM66 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01548A6NM66 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01548A6NM66 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01548A6NM66 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01548A6NM66 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01548A6NM66 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01548A6NM66 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01548A6NM66 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01548A6NM66 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01548A6NM66 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01548A6NM66 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01548A6NM66 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01548A6NM66 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01548A6NM66 AP001271.2-201ENST00000624018 1556 ntBASIC15.53■□□□□ 0.08
LINC01548A6NM66 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01548A6NM66 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.53■□□□□ 0.08
LINC01548A6NM66 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01548A6NM66 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.52■□□□□ 0.08
LINC01548A6NM66 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01548A6NM66 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01548A6NM66 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01548A6NM66 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01548A6NM66 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
LINC01548A6NM66 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01548A6NM66 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01548A6NM66 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LINC01548A6NM66 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01548A6NM66 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
LINC01548A6NM66 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01548A6NM66 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.52■□□□□ 0.08
LINC01548A6NM66 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01548A6NM66 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.52■□□□□ 0.08
LINC01548A6NM66 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms