Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.55■□□□□ 0.4
TVP23AA6NH52 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TVP23AA6NH52 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TVP23AA6NH52 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TVP23AA6NH52 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.54■□□□□ 0.4
TVP23AA6NH52 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.54■□□□□ 0.4
TVP23AA6NH52 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TVP23AA6NH52 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
TVP23AA6NH52 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TVP23AA6NH52 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.54■□□□□ 0.4
TVP23AA6NH52 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TVP23AA6NH52 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.54■□□□□ 0.4
TVP23AA6NH52 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TVP23AA6NH52 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.54■□□□□ 0.4
TVP23AA6NH52 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TVP23AA6NH52 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.54■□□□□ 0.4
TVP23AA6NH52 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TVP23AA6NH52 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TVP23AA6NH52 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.54■□□□□ 0.4
TVP23AA6NH52 AP000974.1-201ENST00000623909 2387 ntBASIC17.54■□□□□ 0.4
TVP23AA6NH52 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TVP23AA6NH52 PHGDH-210ENST00000641115 1638 ntBASIC17.54■□□□□ 0.4
TVP23AA6NH52 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
TVP23AA6NH52 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.53■□□□□ 0.4
TVP23AA6NH52 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.53■□□□□ 0.4
TVP23AA6NH52 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.53■□□□□ 0.4
TVP23AA6NH52 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.53■□□□□ 0.4
TVP23AA6NH52 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 AL512625.2-201ENST00000417533 625 ntBASIC17.53■□□□□ 0.4
TVP23AA6NH52 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.53■□□□□ 0.4
TVP23AA6NH52 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.53■□□□□ 0.4
TVP23AA6NH52 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.53■□□□□ 0.4
TVP23AA6NH52 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.53■□□□□ 0.4
TVP23AA6NH52 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.53■□□□□ 0.4
TVP23AA6NH52 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 IKBKGP1-201ENST00000612193 1073 ntBASIC17.53■□□□□ 0.4
TVP23AA6NH52 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.53■□□□□ 0.4
TVP23AA6NH52 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.53■□□□□ 0.4
TVP23AA6NH52 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TVP23AA6NH52 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TVP23AA6NH52 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TVP23AA6NH52 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TVP23AA6NH52 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TVP23AA6NH52 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TVP23AA6NH52 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TVP23AA6NH52 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
TVP23AA6NH52 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.52■□□□□ 0.4
TVP23AA6NH52 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.52■□□□□ 0.4
TVP23AA6NH52 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.52■□□□□ 0.4
TVP23AA6NH52 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TVP23AA6NH52 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.52■□□□□ 0.4
TVP23AA6NH52 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TVP23AA6NH52 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TVP23AA6NH52 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.52■□□□□ 0.4
TVP23AA6NH52 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TVP23AA6NH52 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TVP23AA6NH52 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TVP23AA6NH52 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TVP23AA6NH52 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TVP23AA6NH52 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TVP23AA6NH52 LSM12P1-201ENST00000411836 588 ntBASIC17.52■□□□□ 0.4
TVP23AA6NH52 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.52■□□□□ 0.4
TVP23AA6NH52 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.52■□□□□ 0.4
TVP23AA6NH52 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.52■□□□□ 0.4
TVP23AA6NH52 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.52■□□□□ 0.4
TVP23AA6NH52 AC080038.1-201ENST00000611274 1154 ntBASIC17.52■□□□□ 0.4
TVP23AA6NH52 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TVP23AA6NH52 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TVP23AA6NH52 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TVP23AA6NH52 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TVP23AA6NH52 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.51■□□□□ 0.39
TVP23AA6NH52 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.51■□□□□ 0.39
TVP23AA6NH52 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TVP23AA6NH52 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TVP23AA6NH52 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.51■□□□□ 0.39
TVP23AA6NH52 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.51■□□□□ 0.39
TVP23AA6NH52 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TVP23AA6NH52 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TVP23AA6NH52 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TVP23AA6NH52 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TVP23AA6NH52 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TVP23AA6NH52 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TVP23AA6NH52 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.51■□□□□ 0.39
TVP23AA6NH52 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms