Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 AC005829.2-201ENST00000571422 1056 ntBASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 AL032819.2-201ENST00000624543 2162 ntBASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM49BA6NDI0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 SLC29A4P1-201ENST00000398760 971 ntBASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 AL138781.1-201ENST00000566567 1274 ntBASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM49BA6NDI0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 RNF165-205ENST00000588679 2904 ntBASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 MYC-209ENST00000641252 345 ntBASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
TRIM49BA6NDI0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM49BA6NDI0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM49BA6NDI0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.64■■□□□ 1.06
TRIM49BA6NDI0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM49BA6NDI0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM49BA6NDI0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms