Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC163A0A0D9SF12 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CCDC163A0A0D9SF12 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC163A0A0D9SF12 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.53■□□□□ 0.72
CCDC163A0A0D9SF12 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC163A0A0D9SF12 AC008622.2-201ENST00000617006 1229 ntBASIC19.53■□□□□ 0.72
CCDC163A0A0D9SF12 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC163A0A0D9SF12 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC163A0A0D9SF12 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC163A0A0D9SF12 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC163A0A0D9SF12 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC163A0A0D9SF12 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC163A0A0D9SF12 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 Z85996.1-201ENST00000494644 937 ntBASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC163A0A0D9SF12 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC163A0A0D9SF12 AC133561.1-201ENST00000568600 2415 ntBASIC19.52■□□□□ 0.71
CCDC163A0A0D9SF12 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC163A0A0D9SF12 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CCDC163A0A0D9SF12 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 AL671277.2-201ENST00000458060 996 ntBASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 AL121894.2-201ENST00000602977 491 ntBASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 AC140113.3-201ENST00000605663 199 ntBASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 AC116407.4-201ENST00000623319 1061 ntBASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC163A0A0D9SF12 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 AL450487.1-201ENST00000426799 995 ntBASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 DUSP5P1-201ENST00000441325 1139 ntBASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC163A0A0D9SF12 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC163A0A0D9SF12 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC163A0A0D9SF12 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC163A0A0D9SF12 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC163A0A0D9SF12 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC163A0A0D9SF12 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms