Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AL121956.5-201ENST00000625261 221 ntBASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LOC102724428A0A0B4J2F2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC25.16■■□□□ 1.62
LOC102724428A0A0B4J2F2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
LOC102724428A0A0B4J2F2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC25.16■■□□□ 1.62
LOC102724428A0A0B4J2F2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
LOC102724428A0A0B4J2F2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC25.16■■□□□ 1.62
LOC102724428A0A0B4J2F2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LOC102724428A0A0B4J2F2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.16■■□□□ 1.62
LOC102724428A0A0B4J2F2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
LOC102724428A0A0B4J2F2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
LOC102724428A0A0B4J2F2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LOC102724428A0A0B4J2F2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.15■■□□□ 1.62
LOC102724428A0A0B4J2F2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LOC102724428A0A0B4J2F2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LOC102724428A0A0B4J2F2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LOC102724428A0A0B4J2F2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC25.15■■□□□ 1.62
LOC102724428A0A0B4J2F2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC25.15■■□□□ 1.62
LOC102724428A0A0B4J2F2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC25.15■■□□□ 1.62
LOC102724428A0A0B4J2F2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC25.15■■□□□ 1.62
LOC102724428A0A0B4J2F2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC25.15■■□□□ 1.62
LOC102724428A0A0B4J2F2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LOC102724428A0A0B4J2F2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 AC006128.1-201ENST00000624704 1661 ntBASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 TSPY17P-201ENST00000450329 467 ntBASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 AL353719.1-201ENST00000566847 864 ntBASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC25.14■■□□□ 1.62
LOC102724428A0A0B4J2F2 TMEM179-206ENST00000616017 1645 ntBASIC25.14■■□□□ 1.61
LOC102724428A0A0B4J2F2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
LOC102724428A0A0B4J2F2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
LOC102724428A0A0B4J2F2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC25.14■■□□□ 1.61
LOC102724428A0A0B4J2F2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
LOC102724428A0A0B4J2F2 AC007225.1-201ENST00000566331 1836 ntBASIC25.14■■□□□ 1.61
LOC102724428A0A0B4J2F2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
LOC102724428A0A0B4J2F2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 ANKRD20A18P-201ENST00000359341 492 ntBASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 GXYLT1P6-201ENST00000456472 1187 ntBASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
LOC102724428A0A0B4J2F2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC25.12■■□□□ 1.61
LOC102724428A0A0B4J2F2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC25.12■■□□□ 1.61
LOC102724428A0A0B4J2F2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC25.12■■□□□ 1.61
LOC102724428A0A0B4J2F2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LOC102724428A0A0B4J2F2 KRT18P48-201ENST00000434763 852 ntBASIC25.12■■□□□ 1.61
LOC102724428A0A0B4J2F2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC25.12■■□□□ 1.61
LOC102724428A0A0B4J2F2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC25.12■■□□□ 1.61
LOC102724428A0A0B4J2F2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC25.12■■□□□ 1.61
LOC102724428A0A0B4J2F2 BID-203ENST00000399765 1879 ntTSL 2 BASIC25.12■■□□□ 1.61
LOC102724428A0A0B4J2F2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LOC102724428A0A0B4J2F2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
LOC102724428A0A0B4J2F2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LOC102724428A0A0B4J2F2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LOC102724428A0A0B4J2F2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LOC102724428A0A0B4J2F2 AC092720.2-201ENST00000602388 1665 ntBASIC25.11■■□□□ 1.61
LOC102724428A0A0B4J2F2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC25.11■■□□□ 1.61
LOC102724428A0A0B4J2F2 IER3-202ENST00000376377 1350 ntBASIC25.11■■□□□ 1.61
LOC102724428A0A0B4J2F2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LOC102724428A0A0B4J2F2 HOMER2P1-201ENST00000455653 964 ntBASIC25.11■■□□□ 1.61
LOC102724428A0A0B4J2F2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LOC102724428A0A0B4J2F2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LOC102724428A0A0B4J2F2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
LOC102724428A0A0B4J2F2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC25.11■■□□□ 1.61
LOC102724428A0A0B4J2F2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LOC102724428A0A0B4J2F2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC25.1■■□□□ 1.61
LOC102724428A0A0B4J2F2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
LOC102724428A0A0B4J2F2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
LOC102724428A0A0B4J2F2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LOC102724428A0A0B4J2F2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
LOC102724428A0A0B4J2F2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
LOC102724428A0A0B4J2F2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC25.1■■□□□ 1.61
LOC102724428A0A0B4J2F2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms