Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 KRT17P1-201ENST00000399211 1546 ntBASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 LSM12P1-201ENST00000411836 588 ntBASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 C2orf69P4-201ENST00000565394 541 ntBASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 IKBKGP1-201ENST00000612193 1073 ntBASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV12-3A0A0B4J271 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 MIR935-201ENST00000401179 91 ntBASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 AL512625.2-201ENST00000417533 625 ntBASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 AL137784.2-201ENST00000607332 1000 ntBASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRAV12-3A0A0B4J271 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 BCL2-203ENST00000589955 5011 ntBASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 AC073111.5-205ENST00000641717 521 ntBASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.61□□□□□ -0.07
TRAV12-3A0A0B4J271 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms