Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV3A0A0B4J244 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV3A0A0B4J244 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 LSM12P1-201ENST00000411836 588 ntBASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 AC092437.1-201ENST00000624794 1048 ntBASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRAV3A0A0B4J244 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV3A0A0B4J244 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms