Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 AC116351.2-201ENST00000606540 1585 ntBASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 UNC93B4-201ENST00000505679 747 ntBASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 AC007952.6-201ENST00000573168 2673 ntBASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 AC003957.1-201ENST00000625108 2673 ntBASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 KRT18P6-201ENST00000555540 1265 ntBASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 SOX15-203ENST00000570788 1093 ntBASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 AC008687.6-201ENST00000596318 630 ntBASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 AC120498.8-201ENST00000614275 531 ntBASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV2A0A0B4J234 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 AL121829.2-201ENST00000620908 328 ntBASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 AC006557.6-201ENST00000623071 864 ntBASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV2A0A0B4J234 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV2A0A0B4J234 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRAV2A0A0B4J234 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV2A0A0B4J234 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV2A0A0B4J234 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV2A0A0B4J234 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV2A0A0B4J234 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV2A0A0B4J234 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV2A0A0B4J234 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms