Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 AC105036.2-201ENST00000569468 176 ntBASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV27A0A087WT01 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 MIR663A-201ENST00000385250 93 ntBASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 GPX1P1-201ENST00000388829 606 ntBASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 CDCA4P2-201ENST00000441182 718 ntBASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV27A0A087WT01 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 Z82202.1-201ENST00000623446 1880 ntBASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 AL020996.1-203ENST00000536896 2307 ntBASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 AF201337.1-201ENST00000520239 748 ntBASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 BX323043.1-201ENST00000641006 1765 ntBASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV27A0A087WT01 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 BX276092.2-201ENST00000417668 665 ntBASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 AL032819.2-201ENST00000624543 2162 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms